(13 nodes) Cationic antimicrobial peptide (CAMP) resistance, and Sterol-sensing domain network (Sphingobacterium sp. ML3W)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIM35965.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AIM36549.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
	AIM37171.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AIM37172.1	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (352 aa)
	AIM37173.1	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1058 aa)
	AIM37786.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	AIM37787.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AIM37788.1	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa)
	AIM37789.1	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1056 aa)
	AIM38464.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	AIM39320.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
	AIM39321.1	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1025 aa)
	AIM39322.1	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (352 aa)

Your Current Organism:

Sphingobacterium sp. ML3W

NCBI taxonomy Id: 1538644
Other names: S. sp. ML3W

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIM35965.1	AIM36549.1	KO02_04115	KO02_07420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AIM35965.1	AIM37171.1	KO02_04115	KO02_11085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AIM35965.1	AIM37172.1	KO02_04115	KO02_11090	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.761
AIM35965.1	AIM37787.1	KO02_04115	KO02_14705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AIM35965.1	AIM37788.1	KO02_04115	KO02_14710	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.825
AIM35965.1	AIM38464.1	KO02_04115	KO02_18530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AIM35965.1	AIM39320.1	KO02_04115	KO02_23445	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AIM35965.1	AIM39321.1	KO02_04115	KO02_23450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.748
AIM35965.1	AIM39322.1	KO02_04115	KO02_23455	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.800
AIM36549.1	AIM35965.1	KO02_07420	KO02_04115	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AIM36549.1	AIM37171.1	KO02_07420	KO02_11085	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AIM36549.1	AIM37172.1	KO02_07420	KO02_11090	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.761
AIM36549.1	AIM37787.1	KO02_07420	KO02_14705	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AIM36549.1	AIM37788.1	KO02_07420	KO02_14710	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.808
AIM36549.1	AIM38464.1	KO02_07420	KO02_18530	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AIM36549.1	AIM39320.1	KO02_07420	KO02_23445	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AIM36549.1	AIM39321.1	KO02_07420	KO02_23450	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.748
AIM36549.1	AIM39322.1	KO02_07420	KO02_23455	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.798
AIM37171.1	AIM35965.1	KO02_11085	KO02_04115	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AIM37171.1	AIM36549.1	KO02_11085	KO02_07420	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900