STRINGSTRING
AIM38428.1 AIM38428.1 AIM38429.1 AIM38429.1 ureD ureD ureG ureG ureF ureF ureE ureE ureC ureC ureB ureB ureA ureA AIM38437.1 AIM38437.1 AIM38438.1 AIM38438.1 AIM38439.1 AIM38439.1 AIM38440.1 AIM38440.1 AIM38441.1 AIM38441.1 AIM38442.1 AIM38442.1 AIM38443.1 AIM38443.1 AIM38444.1 AIM38444.1 AIM38445.1 AIM38445.1 AIM38446.1 AIM38446.1 AIM38447.1 AIM38447.1 AIM38448.1 AIM38448.1 AIM38965.1 AIM38965.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIM38428.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AIM38429.1Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
ureDUrease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (263 aa)
ureGUrease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (212 aa)
ureFUrease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (229 aa)
ureEHypothetical protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. (165 aa)
ureCUrease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
ureBUrease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family. (124 aa)
ureAUrease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family. (100 aa)
AIM38437.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (133 aa)
AIM38438.1Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (812 aa)
AIM38439.1Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
AIM38440.1Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (332 aa)
AIM38441.1Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
AIM38442.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AIM38443.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
AIM38444.1Hydrogenase expression protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
AIM38445.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (129 aa)
AIM38446.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (364 aa)
AIM38447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
AIM38448.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
AIM38965.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
Your Current Organism:
Sphingobacterium sp. ML3W
NCBI taxonomy Id: 1538644
Other names: S. sp. ML3W
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