STRINGSTRING
AIM38245.1 AIM38245.1 hemH hemH hemL hemL AIM35720.1 AIM35720.1 AIM35721.1 AIM35721.1 hemA hemA hemE hemE AIM35831.1 AIM35831.1 ctaB ctaB AIM38541.1 AIM38541.1 AIM38543.1 AIM38543.1 AIM38938.1 AIM38938.1 AIM36931.1 AIM36931.1 AIM37326.1 AIM37326.1 AIM37327.1 AIM37327.1 AIM37611.1 AIM37611.1 AIM37698.1 AIM37698.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIM38245.1Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (342 aa)
hemLGlutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
AIM35720.1Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family. (323 aa)
AIM35721.1Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (530 aa)
hemASerine carboxypeptidase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (413 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (345 aa)
AIM35831.1Cytochrome oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
ctaBPolyprenyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (302 aa)
AIM38541.1Protoporphyrinogen IX oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
AIM38543.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
AIM38938.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
AIM36931.1Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
AIM37326.1Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
AIM37327.1uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
AIM37611.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
AIM37698.1Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
Your Current Organism:
Sphingobacterium sp. ML3W
NCBI taxonomy Id: 1538644
Other names: S. sp. ML3W
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