STRINGSTRING
prmA prmA ADZ25331.1 ADZ25331.1 zapD zapD ADZ25387.1 ADZ25387.1 ADZ25388.1 ADZ25388.1 ADZ25501.1 ADZ25501.1 ADZ25515.1 ADZ25515.1 ADZ25644.1 ADZ25644.1 ADZ25704.1 ADZ25704.1 ADZ25802.1 ADZ25802.1 ADZ25881.1 ADZ25881.1 ADZ25882.1 ADZ25882.1 ADZ25887.1 ADZ25887.1 ADZ25895.1 ADZ25895.1 truA truA ADZ25902.1 ADZ25902.1 ADZ25903.1 ADZ25903.1 ADZ25909.1 ADZ25909.1 ADZ25983.1 ADZ25983.1 ADZ25999.1 ADZ25999.1 ADZ26001.1 ADZ26001.1 ADZ26020.1 ADZ26020.1 ADZ26021.1 ADZ26021.1 ADZ26077.1 ADZ26077.1 ADZ26078.1 ADZ26078.1 ADZ26079.1 ADZ26079.1 ADZ26080.1 ADZ26080.1 ADZ26081.1 ADZ26081.1 ADZ26130.1 ADZ26130.1 ADZ26131.1 ADZ26131.1 ADZ26153.1 ADZ26153.1 ADZ26199.1 ADZ26199.1 ADZ26200.1 ADZ26200.1 ADZ26201.1 ADZ26201.1 ADZ26202.1 ADZ26202.1 ADZ26203.1 ADZ26203.1 ADZ26204.1 ADZ26204.1 ADZ26215.1 ADZ26215.1 ADZ26275.1 ADZ26275.1 flhD flhD flhC flhC ADZ26650.1 ADZ26650.1 ADZ26657.1 ADZ26657.1 ADZ26658.1 ADZ26658.1 ADZ26777.1 ADZ26777.1 ADZ26819.1 ADZ26819.1 ADZ26820.1 ADZ26820.1 ADZ26986.1 ADZ26986.1 ADZ27006.1 ADZ27006.1 ADZ27018.1 ADZ27018.1 ADZ27019.1 ADZ27019.1 ADZ27070.1 ADZ27070.1 ADZ27290.1 ADZ27290.1 ADZ27292.1 ADZ27292.1 mnmA mnmA nudJ nudJ ADZ27544.1 ADZ27544.1 ADZ27680.1 ADZ27680.1 ADZ27681.1 ADZ27681.1 ADZ27682.1 ADZ27682.1 ADZ27683.1 ADZ27683.1 ADZ27684.1 ADZ27684.1 ADZ27685.1 ADZ27685.1 ADZ27699.1 ADZ27699.1 ADZ27700.1 ADZ27700.1 ADZ27701.1 ADZ27701.1 ADZ27702.1 ADZ27702.1 ADZ27703.1 ADZ27703.1 ADZ27704.1 ADZ27704.1 ADZ27705.1 ADZ27705.1 ADZ27706.1 ADZ27706.1 ADZ27707.1 ADZ27707.1 ADZ27708.1 ADZ27708.1 ADZ27709.1 ADZ27709.1 ADZ27710.1 ADZ27710.1 ADZ27711.1 ADZ27711.1 ADZ27712.1 ADZ27712.1 ADZ27713.1 ADZ27713.1 ADZ27714.1 ADZ27714.1 ADZ27765.1 ADZ27765.1 ADZ27774.1 ADZ27774.1 smg smg ADZ27916.1 ADZ27916.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prmARibosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (305 aa)
ADZ25331.1MJ0042 family finger-like protein; KEGG: net:Neut_1897 zinc finger-domain-containing protein; TIGRFAM: Zinc finger/thioredoxin putative; PFAM: Protein of unknown function DUF3426. (275 aa)
zapDUPF0289 protein yacF; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. (251 aa)
ADZ25387.1Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (287 aa)
ADZ25388.1PFAM: Type II secretion system F domain; KEGG: neu:NE0596 type II secretion system protein. (407 aa)
ADZ25501.1PFAM: Sporulation-related domain; KEGG: net:Neut_0306 hypothetical protein. (197 aa)
ADZ25515.1PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1376 putative signal transduction protein. (281 aa)
ADZ25644.1PFAM: Protein of unknown function DUF3108; KEGG: neu:NE0086 hypothetical protein. (240 aa)
ADZ25704.1Major facilitator superfamily MFS_1; KEGG: nmu:Nmul_A2116 lysophospholipid transporter LplT; manually curated; PFAM: Major facilitator superfamily MFS-1. (424 aa)
ADZ25802.1KEGG: sdn:Sden_3449 hypothetical protein. (74 aa)
ADZ25881.1PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tbd:Tbd_2766 hypothetical protein. (283 aa)
ADZ25882.1PEP motif putative anchor domain protein; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial; C-type lectin; KEGG: dsa:Desal_1919 C-type lectin domain protein; SMART: C-type lectin. (207 aa)
ADZ25887.1Protein of unknown function CNP1-like protein; PFAM: Uncharacterised protein domain CNP1; KEGG: nmu:Nmul_A1844 putative lipoprotein. (168 aa)
ADZ25895.1TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: neu:NE0690 transmembrane protein. (842 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (265 aa)
ADZ25902.1Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: net:Neut_1156 sporulation domain-containing protein. (235 aa)
ADZ25903.1PFAM: Colicin V production, CvpA; KEGG: nmu:Nmul_A1907 colicin V production protein. (168 aa)
ADZ25909.1KEGG: neu:NE0044 hypothetical protein. (249 aa)
ADZ25983.1ZipA FtsZ-binding region protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. (399 aa)
ADZ25999.1Hypothetical protein; KEGG: nmu:Nmul_A0564 transmembrane protein. (328 aa)
ADZ26001.1PFAM: Protein of unknown function DUF2782; KEGG: net:Neut_0776 hypothetical protein. (132 aa)
ADZ26020.1KEGG: mfa:Mfla_2030 abortive infection protein; TIGRFAM: Prenyl protease-related; PFAM: Abortive infection protein. (221 aa)
ADZ26021.1PFAM: Type IV pilus assembly PilZ; KEGG: slt:Slit_1652 type IV pilus assembly PilZ. (239 aa)
ADZ26077.1TIGRFAM: Type IV pilus assembly protein PilM; KEGG: slt:Slit_0108 type IV pilus assembly protein PilM. (367 aa)
ADZ26078.1PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN. (194 aa)
ADZ26079.1KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein. (204 aa)
ADZ26080.1PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ. (172 aa)
ADZ26081.1TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; KEGG: net:Neut_1803 type IV pilus secretin PilQ; SMART: Secretin/TonB, short N-terminal; Belongs to the bacterial secretin family. (698 aa)
ADZ26130.1Protein of unknown function DUF540; PFAM: Uncharacterised protein family CysZ; KEGG: nmu:Nmul_A1878 transmembrane protein. (255 aa)
ADZ26131.1PFAM: Protein of unknown function DUF3025; KEGG: gca:Galf_1122 hypothetical protein. (243 aa)
ADZ26153.1Peptidase; KEGG: net:Neut_1363 peptidase. (99 aa)
ADZ26199.1TIGRFAM: Peptidyl-prolyl cis-trans isomerase, EpsD-type; KEGG: mfa:Mfla_2027 hypothetical protein. (322 aa)
ADZ26200.1KEGG: mfa:Mfla_2026 polysaccharide export protein; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain. (272 aa)
ADZ26201.1Chain length determinant protein EpsF; KEGG: mfa:Mfla_2025 lipopolysaccharide biosynthesis; TIGRFAM: Chain length determinant protein EpsF; PFAM: Lipopolysaccharide biosynthesis. (454 aa)
ADZ26202.1KEGG: mmb:Mmol_1794 chain length determinant protein tyrosine kinase EpsG; TIGRFAM: Tyrosine-protein kinase, chain length determinant protein EpsG; Exopolysaccharide synthesis protein. (301 aa)
ADZ26203.1KEGG: nmu:Nmul_A0246 hypothetical protein; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related. (296 aa)
ADZ26204.1EpsI family protein; KEGG: tbd:Tbd_1791 hypothetical protein; TIGRFAM: Methanolan biosynthesis EpsI; PFAM: Methanolan biosynthesis EpsI. (228 aa)
ADZ26215.1CBS domain containing protein; KEGG: nmu:Nmul_A2064 hypothetical protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core. (196 aa)
ADZ26275.1PFAM: Protein of unknown function DUF2320; KEGG: har:HEAR0712 hypothetical protein. (450 aa)
flhDFlagellar transcriptional activator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (105 aa)
flhCFlagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (178 aa)
ADZ26650.1PFAM: Protein of unknown function DUF339; KEGG: neu:NE2372 hypothetical protein. (77 aa)
ADZ26657.1PFAM: Protein of unknown function DUF490; KEGG: net:Neut_1408 hypothetical protein. (1278 aa)
ADZ26658.1PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: net:Neut_1409 surface antigen (D15). (635 aa)
ADZ26777.1PFAM: Protein of unknown function DUF3478; KEGG: net:Neut_1678 hypothetical protein. (132 aa)
ADZ26819.1KEGG: cvi:CV_3590 hypothetical protein. (149 aa)
ADZ26820.1KEGG: mms:mma_1079 hypothetical protein. (150 aa)
ADZ26986.1PFAM: Protein of unknown function DUF1058; KEGG: nmu:Nmul_A1125 hypothetical protein. (160 aa)
ADZ27006.1PFAM: Lytic transglycosylase-like, catalytic; KEGG: neu:NE1318 SLT domain-containing protein. (192 aa)
ADZ27018.1KEGG: gca:Galf_2551 pilus biogenesis protein TapA precursor, putative; Belongs to the N-Me-Phe pilin family. (149 aa)
ADZ27019.1KEGG: net:Neut_2128 putative GAF sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; GAF; SMART: GAF; ATPase, AAA+ type, core. (793 aa)
ADZ27070.1PFAM: Flagellar export chaperone, FliT; KEGG: neu:NE1597 hypothetical protein. (111 aa)
ADZ27290.1PFAM: Protein of unknown function DUF721/UPF0232; KEGG: nmu:Nmul_A2487 hypothetical protein. (163 aa)
ADZ27292.1Ribonuclease II; KEGG: net:Neut_0498 ribonuclease II; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R. (618 aa)
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (359 aa)
nudJPFAM: NUDIX hydrolase domain; KEGG: nmu:Nmul_A2244 NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. (151 aa)
ADZ27544.1Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1117 nucleoid occlusion protein. (214 aa)
ADZ27680.1KEGG: neu:NE1746 fimbrial protein pilin. (152 aa)
ADZ27681.1PFAM: PilC domain; KEGG: net:Neut_1833 putative type 4 fimbrial biogenesis protein PilY1. (1176 aa)
ADZ27682.1KEGG: neu:NE1748 hypothetical protein. (189 aa)
ADZ27683.1KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW. (265 aa)
ADZ27684.1TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV. (171 aa)
ADZ27685.1PFAM: General secretion pathway, GspH; Prepilin-type cleavage/methylation, N-terminal; KEGG: neu:NE1751 putative type-4 fimbrial pilin related signal peptide protein. (192 aa)
ADZ27699.1PFAM: Peptidase, membrane zinc metallopeptidase, putative; KEGG: aeh:Mlg_1818 peptidase, membrane zinc metallopeptidase, putative. (227 aa)
ADZ27700.1KEGG: neu:NE1611 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal. (144 aa)
ADZ27701.1PFAM: Type II secretion system F domain; KEGG: nmu:Nmul_A2589 type II secretion system protein. (394 aa)
ADZ27702.1PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E. (562 aa)
ADZ27703.1KEGG: nmu:Nmul_A2587 hypothetical protein. (277 aa)
ADZ27704.1KEGG: net:Neut_0510 fimbrial assembly family protein. (182 aa)
ADZ27705.1KEGG: nmu:Nmul_A2585 transmembrane protein. (183 aa)
ADZ27706.1KEGG: net:Neut_0512 putative prolin-rich transmembrane protein. (188 aa)
ADZ27707.1KEGG: net:Neut_0513 type II and III secretion system protein; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; SMART: Secretin/TonB, short N-terminal; Belongs to the bacterial secretin family. (756 aa)
ADZ27708.1KEGG: neu:NE1603 putative general secretion pathway GspG related transmembrane protein. (170 aa)
ADZ27709.1PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nmu:Nmul_A2581 N-terminal methylation site. (132 aa)
ADZ27710.1Hypothetical protein; KEGG: net:Neut_0516 putative transmembrane protein. (302 aa)
ADZ27711.1PFAM: Endoribonuclease L-PSP; KEGG: net:Neut_1514 endoribonuclease L-PSP. (130 aa)
ADZ27712.1KEGG: net:Neut_1887 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III. (478 aa)
ADZ27713.1Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core. (347 aa)
ADZ27714.1Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: net:Neut_2337 twitching motility protein; SMART: ATPase, AAA+ type, core. (378 aa)
ADZ27765.1PEP motif putative anchor domain protein; KEGG: app:CAP2UW1_2168 protein of unknown function DUF1555; TIGRFAM: PEP-CTERM anchor; PFAM: PEP-CTERM bacterial. (213 aa)
ADZ27774.1Peptidoglycan-binding lysin domain; KEGG: neu:NE1969 LysM motif-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup. (344 aa)
smgPFAM: Protein of unknown function DUF494; KEGG: net:Neut_0395 hypothetical protein; Belongs to the Smg family. (152 aa)
ADZ27916.1PFAM: Protein of unknown function DUF3460; KEGG: net:Neut_1676 hypothetical protein. (62 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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