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| | ADZ26779.1 | PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: neu:NE1503 Rieske iron-sulfur protein 2Fe-2S subunit. (370 aa) |
| | ADZ26760.1 | PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A1267 phosphate-selective porin O and P. (430 aa) |
| | gcvH | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (129 aa) |
| | gcvPA | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (450 aa) |
| | gcvPB | Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. (484 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (679 aa) |
| | eno | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa) |
| | cysD | TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: pzu:PHZ_c2263 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase. (298 aa) |
| | cysN | Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (634 aa) |
| | ADZ26672.1 | KEGG: nhl:Nhal_2587 hypothetical protein. (184 aa) |
| | ADZ26648.1 | 2-oxoglutarate dehydrogenase, E1 subunit; SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: neu:NE2374 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component. (943 aa) |
| | ADZ26647.1 | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (421 aa) |
| | ADZ26629.1 | KEGG: nmu:Nmul_A0179 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase C-terminal; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core. (444 aa) |
| | ADZ26624.1 | TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (237 aa) |
| | ADZ26601.1 | PFAM: Helix-turn-helix, Fis-type; KEGG: nmu:Nmul_A0132 fis family transcriptional regulator; Belongs to the transcriptional regulatory Fis family. (80 aa) |
| | ADZ26599.1 | KEGG: nmu:Nmul_A0130 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding. (390 aa) |
| | ureB | TIGRFAM: Urease, beta subunit; KEGG: nmu:Nmul_A1240 urease, beta subunit; PFAM: Urease, beta subunit; Belongs to the urease beta subunit family. (106 aa) |
| | ADZ26586.1 | Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (153 aa) |
| | ADZ26582.1 | ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: nmu:Nmul_A1230 hypothetical protein. (277 aa) |
| | ADZ26564.1 | Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: nmu:Nmul_A0730 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily. (351 aa) |
| | ADZ26555.1 | PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbd:Tbd_0244 outer membrane protein. (277 aa) |
| | ADZ26544.1 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (287 aa) |
| | dnaX | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (537 aa) |
| | ADZ26484.1 | HhH-GPD family protein; PFAM: HhH-GPD domain; KEGG: eba:ebA7191 DNA-3-methyladenine glycosidase II. (316 aa) |
| | ADZ26462.1 | Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (436 aa) |
| | ADZ26461.1 | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (886 aa) |
| | ADZ26450.1 | KEGG: net:Neut_1916 TonB-dependent vitamin B12 receptor; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug. (617 aa) |
| | uvrB | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (676 aa) |
| | ADZ26412.1 | KEGG: nhl:Nhal_2591 hypothetical protein. (906 aa) |
| | ADZ26388.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ26371.1 | HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; KEGG: mvn:Mevan_0407 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (270 aa) |
| | ppk | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (693 aa) |
| | ADZ26356.1 | PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: chu:CHU_2436 outer membrane protein. (237 aa) |
| | ffh | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (449 aa) |
| | ADZ26340.1 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (408 aa) |
| | ADZ26325.1 | PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: neu:NE2548 outer membrane protein. (225 aa) |
| | ADZ26316.1 | PFAM: Protein of unknown function DUF2136; KEGG: neu:NE1588 hypothetical protein. (100 aa) |
| | ADZ26315.1 | Transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein. (122 aa) |
| | ADZ26295.1 | KEGG: net:Neut_0324 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS. (67 aa) |
| | trmB | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (221 aa) |
| | ADZ26280.1 | PFAM: DNA helicase, UvrD/REP type; KEGG: nmu:Nmul_A0723 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1158 aa) |
| | ADZ26273.1 | Glycerone kinase; KEGG: eca:ECA0866 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase. (574 aa) |
| | rpoZ | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (68 aa) |
| | ADZ26233.1 | Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_3451 putative signal transduction protein. (286 aa) |
| | sucD-2 | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (291 aa) |
| | ADZ26208.1 | KEGG: nde:NIDE1370 hypothetical protein. (380 aa) |
| | ADZ26203.1 | KEGG: nmu:Nmul_A0246 hypothetical protein; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related. (296 aa) |
| | ADZ26200.1 | KEGG: mfa:Mfla_2026 polysaccharide export protein; TIGRFAM: Polysaccharide export EpsE; PFAM: Polysaccharide export protein; Soluble ligand binding domain. (272 aa) |
| | ADZ26178.1 | PFAM: Helix-turn-helix, HxlR type; KEGG: ava:Ava_1063 transcriptional regulator. (106 aa) |
| | ADZ26163.1 | KEGG: gpb:HDN1F_07110 hypothetical protein. (259 aa) |
| | ADZ26154.1 | Two component transcriptional regulator, winged helix family; KEGG: neu:NE1409 response regulator PhoP; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal. (228 aa) |
| | bioC | Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. (293 aa) |
| | rpoA | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (335 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | secY | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (443 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (143 aa) |
| | ADZ26063.1 | KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain. (63 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (176 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (118 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (125 aa) |
| | gyrA | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (852 aa) |
| | bamD | Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (268 aa) |
| | ADZ26014.1 | Two component transcriptional regulator PhoB, winged helix family; TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: net:Neut_2082 two component transcriptional regulator, winged helix family protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal. (242 aa) |
| | dcd | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. (188 aa) |
| | ADZ25909.1 | KEGG: neu:NE0044 hypothetical protein. (249 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (289 aa) |
| | leuD | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (212 aa) |
| | leuC | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa) |
| | ADZ25884.1 | Transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; KEGG: nmu:Nmul_A0947 putative transcriptional regulator. (118 aa) |
| | ADZ25861.1 | KEGG: nmu:Nmul_A1956 hypothetical protein. (473 aa) |
| | ADZ25854.1 | KEGG: chu:CHU_2249 pyruvate dehydrogenase (cytochrome); PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain. (576 aa) |
| | ADZ25850.1 | PFAM: Protein of unknown function DUF86; KEGG: mmw:Mmwyl1_1312 hypothetical protein. (146 aa) |
| | ADZ25788.1 | KEGG: nde:NIDE1370 hypothetical protein. (386 aa) |
| | ADZ25848.1 | Restriction modification system DNA specificity domain; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: mba:Mbar_A1015 hypothetical protein. (467 aa) |
| | ADZ25770.1 | KEGG: gca:Galf_2077 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD domain. (287 aa) |
| | ADZ25765.1 | PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein. (386 aa) |
| | tatA | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (109 aa) |
| | tatB | Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (131 aa) |
| | tatC | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (259 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (322 aa) |
| | uvrA | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (939 aa) |
| | ADZ25629.1 | PFAM: Porin, Gram-negative type; KEGG: nmu:Nmul_A2561 porin. (401 aa) |
| | rpmF | KEGG: neu:NE1644 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | ADZ25581.1 | KEGG: gca:Galf_1981 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like. (580 aa) |
| | ADZ25570.1 | KEGG: nmu:Nmul_A2444 ubiquinone biosynthesis hydroxylase family protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding. (389 aa) |
| | ADZ25564.1 | TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; PFAM: Helix-hairpin-helix motif; KEGG: nmu:Nmul_A2222 competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding motif, class 1. (95 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1154 aa) |
| | ADZ25540.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ25537.1 | KEGG: neu:NE1584 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system. (98 aa) |
| | ADZ25536.1 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (82 aa) |
| | ADZ25523.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (462 aa) |
| | priB | Single-strand binding protein/Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (98 aa) |
| | ADZ25518.1 | TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: slt:Slit_0277 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal. (187 aa) |
| | ADZ25515.1 | PFAM: Metal-dependent hydrolase HDOD; KEGG: slt:Slit_1376 putative signal transduction protein. (281 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (348 aa) |
| | ruvA | Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (193 aa) |
| | atpC | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (140 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (459 aa) |
| | atpG | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa) |
| | atpH | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (178 aa) |
| | atpF | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (157 aa) |
| | atpE | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (90 aa) |
| | atpB | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (269 aa) |
| | ADZ25428.1 | SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; KEGG: neu:NE2086 flagellar ATP synthase; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain. (466 aa) |
| | ribH | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (160 aa) |
| | ADZ25399.1 | PFAM: Metal-dependent hydrolase HDOD; KEGG: app:CAP2UW1_1706 putative signal transduction protein. (280 aa) |
| | ADZ25378.1 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa) |
| | ADZ25376.1 | PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: ava:Ava_3499 restriction modification system DNA specificity subunit. (428 aa) |
| | sucD | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa) |
| | ADZ25365.1 | Citryl-CoA lyase; KEGG: neu:NE1809 beta subunit of citrate lyase; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family. (318 aa) |
| | ilvA | Threonine dehydratase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (503 aa) |
| | ADZ25329.1 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (453 aa) |
| | ADZ25328.1 | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (160 aa) |
| | ADZ25314.1 | PFAM: Plasmid stabilisation system; KEGG: bgl:bglu_1g12000 hypothetical protein. (88 aa) |
| | ADZ25312.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ25281.1 | KEGG: mes:Meso_3789 relaxase/mobilization nuclease domain-containing protein. (432 aa) |
| | gatA | glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (482 aa) |
| | ADZ25215.1 | TIGRFAM: DNA polymerase III, delta subunit; KEGG: nmu:Nmul_A0513 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta. (334 aa) |
| | ADZ25185.1 | HhH-GPD family protein; KEGG: neu:NE0981 HhH-GPD; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1. (205 aa) |
| | ADZ25184.1 | PFAM: Methyltransferase type 11; KEGG: aoe:Clos_1084 methyltransferase type 11. (216 aa) |
| | ADZ25183.1 | PFAM: Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: gca:Galf_0381 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal. (787 aa) |
| | ADZ25180.1 | Restriction modification system DNA specificity domain; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: gca:Galf_2918 restriction modification system DNA specificity domain. (575 aa) |
| | ADZ25164.1 | TIGRFAM: Allophanate hydrolase; KEGG: nmu:Nmul_A0944 allophanate hydrolase; PFAM: Amidase. (607 aa) |
| | ADZ25126.1 | KEGG: nmu:Nmul_A1770 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal. (604 aa) |
| | ADZ25123.1 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (371 aa) |
| | ADZ27927.1 | Restriction modification system DNA specificity domain; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: paa:Paes_2397 restriction modification system DNA specificity domain. (420 aa) |
| | ADZ27924.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ27911.1 | PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nmu:Nmul_A2510 TonB-dependent receptor. (670 aa) |
| | dxr | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (395 aa) |
| | rpsB | Ribosomal protein S2; KEGG: nmu:Nmul_A0657 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (239 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (599 aa) |
| | ADZ27834.1 | PFAM: Protein of unknown function DUF3631; KEGG: rso:RSc2483 hypothetical protein. (494 aa) |
| | ADZ27823.1 | KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (455 aa) |
| | ADZ27820.1 | KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (458 aa) |
| | ftsE | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (217 aa) |
| | ADZ27786.1 | Hypothetical protein; Manually curated; KEGG: avn:Avin_15960 ABC-2 transporter, permease component. (73 aa) |
| | ADZ27781.1 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (570 aa) |
| | ADZ27752.1 | KEGG: nmu:Nmul_A2509 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease. (415 aa) |
| | ADZ27732.1 | PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: net:Neut_2403 OmpA/MotB domain-containing protein. (227 aa) |
| | ADZ27700.1 | KEGG: neu:NE1611 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal. (144 aa) |
| | ADZ27685.1 | PFAM: General secretion pathway, GspH; Prepilin-type cleavage/methylation, N-terminal; KEGG: neu:NE1751 putative type-4 fimbrial pilin related signal peptide protein. (192 aa) |
| | ADZ27680.1 | KEGG: neu:NE1746 fimbrial protein pilin. (152 aa) |
| | ADZ27618.1 | KEGG: nmu:Nmul_A0706 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal. (229 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (438 aa) |
| | ADZ27525.1 | TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: neu:NE1773 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit. (158 aa) |
| | ADZ27524.1 | NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (425 aa) |
| | ADZ27523.1 | NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (806 aa) |
| | ADZ27517.1 | TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: nmu:Nmul_A1103 NADH dehydrogenase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal. (494 aa) |
| | xseA | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (450 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (128 aa) |
| | ADZ27503.1 | Protein of unknown function UPF0027; PFAM: Uncharacterised protein family UPF0027; KEGG: rsl:RPSI07_3186 hypothetical protein. (456 aa) |
| | ADZ27481.1 | KEGG: noc:Noc_2414 flavoprotein WrbA; TIGRFAM: Flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase. (201 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (597 aa) |
| | ADZ27461.1 | PFAM: Permease YjgP/YjgQ, predicted; KEGG: net:Neut_1103 permease YjgP/YjgQ family protein. (352 aa) |
| | ADZ27460.1 | PFAM: Permease YjgP/YjgQ, predicted; KEGG: neu:NE0801 hypothetical protein. (358 aa) |
| | xseB | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (84 aa) |
| | ADZ27451.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ27424.1 | Glycerol-3-phosphate dehydrogenase; KEGG: slt:Slit_2459 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase. (529 aa) |
| | ADZ27420.1 | KEGG: nde:NIDE1370 hypothetical protein. (387 aa) |
| | ADZ27419.1 | KEGG: nde:NIDE1370 hypothetical protein. (388 aa) |
| | ADZ27407.1 | KEGG: net:Neut_1130 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain. (128 aa) |
| | ADZ27399.1 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa) |
| | ADZ27390.1 | KEGG: neu:NE2568 ArsR family regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (108 aa) |
| | ADZ27377.1 | Protein of unknown function DUF140; KEGG: nmu:Nmul_A2748 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140. (265 aa) |
| | ADZ27372.1 | PFAM: ABC-2 type transporter; KEGG: nmu:Nmul_A2743 hypothetical protein. (251 aa) |
| | ADZ27371.1 | PFAM: BolA protein; KEGG: nmu:Nmul_A2742 BolA-like protein; Belongs to the BolA/IbaG family. (81 aa) |
| | ADZ27335.1 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa) |
| | ADZ27330.1 | PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: mmb:Mmol_0462 peptidase S24 and S26 domain protein; Belongs to the peptidase S24 family. (206 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (425 aa) |
| | uvrC | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (605 aa) |
| | ADZ27311.1 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (954 aa) |
| | ADZ27310.1 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (381 aa) |
| | ADZ27307.1 | KEGG: aci:ACIAD1890 fumarate hydratase. (34 aa) |
| | ADZ27306.1 | PFAM: Plasmid stabilisation system; KEGG: nhl:Nhal_1008 phage protein. (85 aa) |
| | fumC | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (461 aa) |
| | ADZ27300.1 | PFAM: ABC-2 type transporter; KEGG: mes:Meso_3693 ABC-2 type transporter. (275 aa) |
| | ADZ27286.1 | Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (415 aa) |
| | ADZ27280.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | ADZ27264.1 | KEGG: bam:Bamb_4189 plasmid stability protein-like protein. (79 aa) |
| | ADZ27262.1 | KEGG: noc:Noc_0284 hypothetical protein. (104 aa) |
| | ADZ27261.1 | Transcriptional regulator, XRE family; KEGG: neu:NE0189 helix-hairpin-helix DNA-binding motif-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. (102 aa) |
| | ADZ27255.1 | Manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core. (272 aa) |
| | ADZ27245.1 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa) |
| | ADZ27239.1 | FeS assembly protein SufB; KEGG: nmu:Nmul_A0696 cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD. (478 aa) |
| | ADZ27238.1 | TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: net:Neut_1240 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core. (264 aa) |
| | ADZ27237.1 | KEGG: nmu:Nmul_A0698 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD. (435 aa) |
| | ADZ27183.1 | Protein of unknown function DUF140; KEGG: nmu:Nmul_A1981 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140. (370 aa) |
| | ADZ27172.1 | TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: nmu:Nmul_A1386 DNA polymerase III, delta prime subunit. (346 aa) |
| | ubiE | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (244 aa) |
| | ADZ27158.1 | Two component transcriptional regulator PhoB, winged helix family; TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: azo:azo0164 phosphate regulon transcriptional regulatory protein; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal. (240 aa) |
| | ADZ27126.1 | PFAM: Phosphate-selective porin O/P; KEGG: nmu:Nmul_A2678 phosphate-selective porin O and P. (573 aa) |
| | hslV | ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (173 aa) |
| | hslU | ATP-dependent hsl protease ATP-binding subunit hslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (440 aa) |
| | ADZ27083.1 | KEGG: nde:NIDE1370 hypothetical protein. (387 aa) |
| | ADZ27082.1 | KEGG: nde:NIDE1370 hypothetical protein. (386 aa) |
| | ADZ27080.1 | PFAM: Glycoside hydrolase, family 42, N-terminal; KEGG: nde:NIDE1370 hypothetical protein. (387 aa) |
| | ADZ27075.1 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa) |
| | ADZ27060.1 | PFAM: DNA polymerase III chi subunit, HolC; KEGG: nmu:Nmul_A0745 DNA polymerase III chi subunit, HolC. (159 aa) |
| | ADZ27034.1 | Phosphate ABC transporter, periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (349 aa) |
| | ADZ27013.1 | TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: nmu:Nmul_A0474 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain. (567 aa) |
| | gpsA | PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; KEGG: nmu:Nmul_A1126 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (330 aa) |
| | ADZ26982.1 | Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: neu:NE2205 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR. (261 aa) |
| | ADZ26981.1 | ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: nmu:Nmul_A2334 extracellular solute-binding protein. (728 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa) |
| | rpoB | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1357 aa) |
| | rpoC | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1403 aa) |
| | ADZ26947.1 | Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: net:Neut_2302 ABC transporter-related protein; SMART: ATPase, AAA+ type, core. (240 aa) |
| | ADZ26946.1 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (482 aa) |
| | ADZ26945.1 | KEGG: neu:NE0061 sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein. (107 aa) |
| | ADZ26935.1 | SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: nmu:Nmul_A1280 type I secretion system ATPase, PrtD; PFAM: ABC transporter-like; ABC transporter, transmembrane domain. (594 aa) |
| | cysA | Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (366 aa) |
| | carA | TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: nmu:Nmul_A0478 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; Belongs to the CarA family. (383 aa) |
| | ADZ26888.1 | KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa) |
| | ADZ26878.1 | KEGG: nhl:Nhal_1339 hypothetical protein. (824 aa) |
| | ADZ26870.1 | Arsenite methyltransferase; KEGG: hch:HCH_02988 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase; PFAM: Methyltransferase type 11. (348 aa) |
| | ADZ26839.1 | KEGG: nmu:Nmul_A0863 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit. (129 aa) |
| | ADZ26817.1 | TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: rme:Rmet_3328 ATP-dependent DNA helicase RecQ; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. (651 aa) |
| | ADZ26811.1 | KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (737 aa) |
