STRINGSTRING
ubiX ubiX gyrB gyrB ADZ25254.1 ADZ25254.1 ADZ25312.1 ADZ25312.1 ADZ25341.1 ADZ25341.1 rpsF rpsF priB priB rpsR rpsR rplI rplI ADZ25523.1 ADZ25523.1 ADZ25540.1 ADZ25540.1 clpS clpS rpmF rpmF rplS rplS rimM rimM rpsP rpsP ADZ25722.1 ADZ25722.1 ADZ25750.1 ADZ25750.1 ADZ25794.1 ADZ25794.1 ADZ25798.1 ADZ25798.1 ADZ25829.1 ADZ25829.1 ADZ25855.1 ADZ25855.1 ADZ25920.1 ADZ25920.1 hemA hemA rpmA rpmA rplU rplU gyrA gyrA rpsL rpsL rpsG rpsG rpsJ rpsJ rplC rplC rplD rplD rplW rplW rplB rplB rpsS rpsS rplV rplV rpsC rpsC rplP rplP rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsN rpsN rpsH rpsH rplF rplF rplR rplR rpsE rpsE ADZ26063.1 ADZ26063.1 rplO rplO rpsM rpsM rpsK rpsK rpsD rpsD rplQ rplQ ADZ26149.1 ADZ26149.1 rpmE rpmE ADZ26203.1 ADZ26203.1 rpsO rpsO ADZ26258.1 ADZ26258.1 rpmG rpmG rpmB rpmB ADZ26388.1 ADZ26388.1 ADZ26399.1 ADZ26399.1 ADZ26415.1 ADZ26415.1 ADZ26416.1 ADZ26416.1 nadD nadD ADZ26495.1 ADZ26495.1 ADZ26517.1 ADZ26517.1 ADZ26552.1 ADZ26552.1 ADZ26570.1 ADZ26570.1 ADZ26601.1 ADZ26601.1 ADZ26629.1 ADZ26629.1 rpsT rpsT ADZ26677.1 ADZ26677.1 ADZ26722.1 ADZ26722.1 ADZ26768.1 ADZ26768.1 priA priA ADZ26811.1 ADZ26811.1 ADZ26817.1 ADZ26817.1 miaA miaA ADZ26888.1 ADZ26888.1 ADZ26902.1 ADZ26902.1 ADZ26945.1 ADZ26945.1 rplT rplT rpmI rpmI rplL rplL rplJ rplJ rplA rplA rplK rplK ADZ27060.1 ADZ27060.1 ADZ27075.1 ADZ27075.1 selO selO ADZ27110.1 ADZ27110.1 ADZ27245.1 ADZ27245.1 ADZ27255.1 ADZ27255.1 ADZ27280.1 ADZ27280.1 ADZ27283.1 ADZ27283.1 ADZ27335.1 ADZ27335.1 ADZ27357.1 ADZ27357.1 ADZ27399.1 ADZ27399.1 ADZ27451.1 ADZ27451.1 rpmH rpmH ADZ27544.1 ADZ27544.1 rplM rplM rpsI rpsI ADZ27728.1 ADZ27728.1 ADZ27777.1 ADZ27777.1 ADZ27781.1 ADZ27781.1 ihfB ihfB ADZ27794.1 ADZ27794.1 ADZ27820.1 ADZ27820.1 ADZ27823.1 ADZ27823.1 ADZ27834.1 ADZ27834.1 dnaG dnaG rpsU rpsU ispE ispE rplY rplY rpsB rpsB ADZ27917.1 ADZ27917.1 ADZ27919.1 ADZ27919.1 ADZ27924.1 ADZ27924.1 ADZ27940.1 ADZ27940.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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co-expression
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ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (204 aa)
gyrBDNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (806 aa)
ADZ25254.1Serine--pyruvate transaminase; KEGG: neu:NE0034 aminotransferase class-V; PFAM: Aminotransferase, class V/Cysteine desulfurase. (405 aa)
ADZ25312.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
ADZ25341.1PFAM: Patatin/Phospholipase A2-related; KEGG: svo:SVI_2442 patatin-like phospholipase family. (308 aa)
rpsFRibosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (139 aa)
priBSingle-strand binding protein/Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (98 aa)
rpsRRibosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (94 aa)
rplIRibosomal protein L9; Binds to the 23S rRNA. (151 aa)
ADZ25523.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (462 aa)
ADZ25540.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (102 aa)
rpmFKEGG: neu:NE1644 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family. (59 aa)
rplSRibosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (140 aa)
rimMRibosome maturation factor rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (167 aa)
rpsPKEGG: net:Neut_0445 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (88 aa)
ADZ25722.1Cupin, JmjC-type; KEGG: nmu:Nmul_A1143 cupin region; PFAM: Cupin, JmjC-type; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase. (369 aa)
ADZ25750.1PFAM: Protein of unknown function DUF185; KEGG: nmu:Nmul_A0337 hypothetical protein. (395 aa)
ADZ25794.1PFAM: Class II aldolase/adducin, N-terminal; KEGG: neu:NE0048 class II aldolase/adducin domain protein. (261 aa)
ADZ25798.1PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: slt:Slit_0986 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain. (118 aa)
ADZ25829.1TIGRFAM: Squalene cyclase; Hopene cyclase; KEGG: net:Neut_1507 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (665 aa)
ADZ25855.1PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1960 ADP-ribosylation/crystallin J1. (375 aa)
ADZ25920.1PFAM: ADP-ribosylation/Crystallin J1; KEGG: neu:NE0396 hypothetical protein. (360 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (417 aa)
rpmAKEGG: nmu:Nmul_A1816 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)
rplURibosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa)
gyrADNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (852 aa)
rpsLRibosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (125 aa)
rpsGRibosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJRibosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (215 aa)
rplDRibosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. (206 aa)
rplWRibosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (111 aa)
rplBRibosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa)
rpsSRibosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rplVRibosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (118 aa)
rpsCRibosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (272 aa)
rplPRibosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa)
rpmCRibosomal protein L29; KEGG: bgl:bglu_1g02660 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (67 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (81 aa)
rplNRibosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplXRibosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (105 aa)
rplERibosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rpsNRibosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rpsHRibosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (131 aa)
rplFRibosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rplRRibosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (118 aa)
rpsERibosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (176 aa)
ADZ26063.1KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain. (63 aa)
rplORibosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (143 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (119 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpsDRibosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa)
rplQKEGG: nmu:Nmul_A0793 ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17. (133 aa)
ADZ26149.1KEGG: rbi:RB2501_13709 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal. (434 aa)
rpmERibosomal protein L31; Binds the 23S rRNA. (66 aa)
ADZ26203.1KEGG: nmu:Nmul_A0246 hypothetical protein; TIGRFAM: Exosortase 2; Exosortase, EpsH; PFAM: Exosortase EpsH-related. (296 aa)
rpsORibosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
ADZ26258.1Dynamin family protein; PFAM: Dynamin, GTPase domain; KEGG: neu:NE1856 hypothetical protein. (487 aa)
rpmGKEGG: mfa:Mfla_0311 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (51 aa)
rpmBKEGG: neu:NE1465 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
ADZ26388.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
ADZ26399.1TIGRFAM: queuosine biosynthesis protein QueD; KEGG: nmu:Nmul_A1944 putative 6-pyruvoyl tetrahydropterin synthase. (149 aa)
ADZ26415.1PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo-related); KEGG: gca:Galf_1560 hypothetical protein; Belongs to the MEMO1 family. (271 aa)
ADZ26416.1KEGG: slt:Slit_1845 AMMECR1 domain protein; TIGRFAM: AMMECR1; PFAM: AMMECR1. (196 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (225 aa)
ADZ26495.1UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (108 aa)
ADZ26517.1KEGG: sbl:Sbal_0637 hypothetical protein. (181 aa)
ADZ26552.1Uncharacterized protein family UPF0310; PFAM: Protein of unknown function DUF55; KEGG: nmu:Nmul_A0614 hypothetical protein. (151 aa)
ADZ26570.1Uncharacterized protein family UPF0283; PFAM: Protein of unknown function DUF697; KEGG: alv:Alvin_1745 hypothetical protein. (409 aa)
ADZ26601.1PFAM: Helix-turn-helix, Fis-type; KEGG: nmu:Nmul_A0132 fis family transcriptional regulator; Belongs to the transcriptional regulatory Fis family. (80 aa)
ADZ26629.1KEGG: nmu:Nmul_A0179 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase C-terminal; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core. (444 aa)
rpsTRibosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)
ADZ26677.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (559 aa)
ADZ26722.1Beta-Casp domain; KEGG: neu:NE0025 metallo-beta-lactamase superfamily protein; PFAM: Beta-Casp domain; RNA-metabolising metallo-beta-lactamase; Beta-lactamase-like; SMART: Beta-lactamase-like. (465 aa)
ADZ26768.1PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1967 TetR family transcriptional regulator. (198 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (737 aa)
ADZ26811.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
ADZ26817.1TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: rme:Rmet_3328 ATP-dependent DNA helicase RecQ; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain. (651 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (318 aa)
ADZ26888.1KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa)
ADZ26902.1KEGG: slo:Shew_3054 hypothetical protein. (159 aa)
ADZ26945.1KEGG: neu:NE0061 sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein. (107 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa)
rpmIPFAM: Ribosomal protein L35; manually curated; TIGRFAM: Ribosomal protein L35, non-mitochondrial; KEGG: eba:ebC8 50S ribosomal protein L35; HAMAP: Ribosomal protein L35, non-mitochondrial; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)
rplLRibosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (126 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (171 aa)
rplARibosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (231 aa)
rplKRibosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa)
ADZ27060.1PFAM: DNA polymerase III chi subunit, HolC; KEGG: nmu:Nmul_A0745 DNA polymerase III chi subunit, HolC. (159 aa)
ADZ27075.1KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (493 aa)
ADZ27110.1Riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: nmu:Nmul_A2653 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; Belongs to the ribF family. (322 aa)
ADZ27245.1KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa)
ADZ27255.1Manually curated; PFAM: IstB-like ATP-binding protein; KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; SMART: ATPase, AAA+ type, core. (272 aa)
ADZ27280.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
ADZ27283.1PFAM: Stringent starvation protein B; KEGG: rsc:RCFBP_10526 stringent starvation protein B, ClpXP protease specificity-enhancing factor. (140 aa)
ADZ27335.1KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa)
ADZ27357.1TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Domain of unknown function DUF1605; KEGG: nmu:Nmul_A1393 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; ATPase, AAA+ type, core. (1252 aa)
ADZ27399.1KEGG: atu:Atu4861 IS21 family transposase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (273 aa)
ADZ27451.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
rpmHKEGG: tmz:Tmz1t_2334 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
ADZ27544.1Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nmu:Nmul_A1117 nucleoid occlusion protein. (214 aa)
rplMRibosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (144 aa)
rpsIKEGG: neu:NE1483 30S ribosomal protein S9; manually curated; PFAM: Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa)
ADZ27728.1PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nmu:Nmul_A0685 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain. (144 aa)
ADZ27777.1SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: nmu:Nmul_A0396 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain. (838 aa)
ADZ27781.1Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (570 aa)
ihfBIntegration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (96 aa)
ADZ27794.1PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: nmu:Nmul_A0712 pterin-4-alpha-carbinolamine dehydratase. (113 aa)
ADZ27820.1KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (458 aa)
ADZ27823.1KEGG: tmz:Tmz1t_3172 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (455 aa)
ADZ27834.1PFAM: Protein of unknown function DUF3631; KEGG: rso:RSc2483 hypothetical protein. (494 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (599 aa)
rpsUKEGG: nmu:Nmul_A2060 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; PFAM: Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (70 aa)
ispE4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (279 aa)
rplYRibosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (206 aa)
rpsBRibosomal protein S2; KEGG: nmu:Nmul_A0657 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (239 aa)
ADZ27917.1PFAM: ADP-ribosylation/Crystallin J1; KEGG: nmu:Nmul_A1026 hypothetical protein. (324 aa)
ADZ27919.1TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: nmu:Nmul_A2767 ParB-like partition proteins; SMART: ParB-like nuclease; Belongs to the ParB family. (279 aa)
ADZ27924.1KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core. (260 aa)
ADZ27940.1PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: bpd:BURPS668_0139 cytidine/deoxycytidylate deaminase family protein. (532 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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