(11 nodes) Pilus organization network (Nitrosomonas sp. AL212)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADZ26078.1	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN. (194 aa)
	ADZ26080.1	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ. (172 aa)
	ADZ27713.1	Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core. (347 aa)
	ADZ27709.1	PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: nmu:Nmul_A2581 N-terminal methylation site. (132 aa)
	ADZ27705.1	KEGG: nmu:Nmul_A2585 transmembrane protein. (183 aa)
	ADZ27702.1	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E. (562 aa)
	ADZ27684.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV. (171 aa)
	ADZ27683.1	KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW. (265 aa)
	ADZ27682.1	KEGG: neu:NE1748 hypothetical protein. (189 aa)
	ADZ27680.1	KEGG: neu:NE1746 fimbrial protein pilin. (152 aa)
	ADZ26079.1	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein. (204 aa)

Your Current Organism:

Nitrosomonas sp. AL212

NCBI taxonomy Id: 153948
Other names: N. sp. AL212

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADZ26078.1	ADZ26079.1	NAL212_1168	NAL212_1169	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	0.997
ADZ26078.1	ADZ26080.1	NAL212_1168	NAL212_1170	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ.	0.997
ADZ26078.1	ADZ27680.1	NAL212_1168	NAL212_2895	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	KEGG: neu:NE1746 fimbrial protein pilin.	0.795
ADZ26078.1	ADZ27682.1	NAL212_1168	NAL212_2897	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	KEGG: neu:NE1748 hypothetical protein.	0.563
ADZ26078.1	ADZ27683.1	NAL212_1168	NAL212_2898	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW.	0.708
ADZ26078.1	ADZ27684.1	NAL212_1168	NAL212_2899	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV.	0.749
ADZ26078.1	ADZ27702.1	NAL212_1168	NAL212_2917	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E.	0.685
ADZ26078.1	ADZ27705.1	NAL212_1168	NAL212_2920	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	KEGG: nmu:Nmul_A2585 transmembrane protein.	0.817
ADZ26078.1	ADZ27713.1	NAL212_1168	NAL212_2928	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core.	0.513
ADZ26079.1	ADZ26078.1	NAL212_1169	NAL212_1168	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	0.997
ADZ26079.1	ADZ26080.1	NAL212_1169	NAL212_1170	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ.	0.995
ADZ26079.1	ADZ27680.1	NAL212_1169	NAL212_2895	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	KEGG: neu:NE1746 fimbrial protein pilin.	0.776
ADZ26079.1	ADZ27682.1	NAL212_1169	NAL212_2897	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	KEGG: neu:NE1748 hypothetical protein.	0.554
ADZ26079.1	ADZ27683.1	NAL212_1169	NAL212_2898	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	KEGG: reu:Reut_A0785 putative Tfp pilus assembly protein PilW.	0.747
ADZ26079.1	ADZ27684.1	NAL212_1169	NAL212_2899	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV.	0.758
ADZ26079.1	ADZ27702.1	NAL212_1169	NAL212_2917	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E.	0.482
ADZ26079.1	ADZ27713.1	NAL212_1169	NAL212_2928	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core.	0.573
ADZ26080.1	ADZ26078.1	NAL212_1170	NAL212_1168	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ.	PFAM: Fimbrial assembly; KEGG: neu:NE2315 putative type 4 fimbrial biogenesis protein PilN.	0.997
ADZ26080.1	ADZ26079.1	NAL212_1170	NAL212_1169	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ.	KEGG: neu:NE2314 putative fimbrial type-4 assembly membrane transmembrane protein.	0.995
ADZ26080.1	ADZ27680.1	NAL212_1170	NAL212_2895	PFAM: Pilus assembly protein PilP; KEGG: net:Neut_1804 pilus assembly protein, PilQ.	KEGG: neu:NE1746 fimbrial protein pilin.	0.775