STRINGSTRING
ADZ26946.1 ADZ26946.1 ADZ26880.1 ADZ26880.1 flhC flhC ADZ27347.1 ADZ27347.1 flhD flhD ADZ25925.1 ADZ25925.1 ADZ25172.1 ADZ25172.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ26946.1RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (482 aa)
ADZ26880.1PFAM: Prophage CP4-57 regulatory; KEGG: vcj:VCD_002586 transcriptional regulator. (67 aa)
flhCFlagellar transcriptional activator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. (178 aa)
ADZ27347.1PFAM: Prophage CP4-57 regulatory; KEGG: gca:Galf_2036 phage transcriptional regulator, AlpA. (76 aa)
flhDFlagellar transcriptional activator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. (105 aa)
ADZ25925.1Hypothetical protein; KEGG: meh:M301_1799 phage transcriptional regulator, AlpA. (81 aa)
ADZ25172.1Transcriptional regulator, MerR family; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: hse:Hsero_1607 transcription regulator protein; SMART: HTH transcriptional regulator, MerR. (155 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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