STRINGSTRING
ADZ27713.1 ADZ27713.1 ADZ27702.1 ADZ27702.1 ADZ27019.1 ADZ27019.1 ADZ27714.1 ADZ27714.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ27713.1Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: neu:NE0965 twitching mobility protein; SMART: ATPase, AAA+ type, core. (347 aa)
ADZ27702.1PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E. (562 aa)
ADZ27019.1KEGG: net:Neut_2128 putative GAF sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; GAF; SMART: GAF; ATPase, AAA+ type, core. (793 aa)
ADZ27714.1Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: net:Neut_2337 twitching motility protein; SMART: ATPase, AAA+ type, core. (378 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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