STRINGSTRING
nusA nusA rnr rnr pnp pnp ADZ26467.1 ADZ26467.1 ADZ26634.1 ADZ26634.1 ADZ27781.1 ADZ27781.1 rne rne
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (490 aa)
rnrRibonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (741 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (709 aa)
ADZ26467.1Ribonuclease, Rne/Rng family; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: net:Neut_1614 ribonuclease, Rne/Rng family protein; SMART: RNA-binding domain, S1. (484 aa)
ADZ26634.1Tex-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1. (740 aa)
ADZ27781.1Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (570 aa)
rneRibonuclease, Rne/Rng family; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (837 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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