STRINGSTRING
ADZ27496.1 ADZ27496.1 ADZ27655.1 ADZ27655.1 ADZ27268.1 ADZ27268.1 ADZ27019.1 ADZ27019.1 ADZ25965.1 ADZ25965.1 ADZ25658.1 ADZ25658.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADZ27496.1TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hse:Hsero_4138 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted. (373 aa)
ADZ27655.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: meh:M301_2309 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF. (753 aa)
ADZ27268.1KEGG: nmu:Nmul_A1663 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain. (382 aa)
ADZ27019.1KEGG: net:Neut_2128 putative GAF sensor protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; GAF; SMART: GAF; ATPase, AAA+ type, core. (793 aa)
ADZ25965.1Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Signal transduction response regulator, receiver domain; PAS fold-3; Diguanylate cyclase, predicted; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; Signal transduction response regulator, receiver domain; GAF. (1136 aa)
ADZ25658.1SMART: Diguanylate cyclase, predicted; HAMP linker domain; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: tau:Tola_1191 diguanylate cyclase with GAF sensor; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; GAF. (411 aa)
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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