10 items (Bacillus weihaiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APH03568.1	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	APH04701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
	APH04702.1	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	APH05295.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
	APH05296.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
	APH05947.1	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	APH06366.1	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
	APH06367.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	APH06368.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (670 aa)
	APH06533.1	EDD domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)

Your Current Organism:

Bacillus weihaiensis

NCBI taxonomy Id: 1547283
Other names: B. weihaiensis, Bacillus sp. Alg07, strain Alg07

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APH03568.1	APH05295.1	A9C19_01700	A9C19_11305	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APH03568.1	APH05296.1	A9C19_01700	A9C19_11310	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
APH04701.1	APH04702.1	A9C19_08030	A9C19_08035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.461
APH04702.1	APH04701.1	A9C19_08035	A9C19_08030	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.461
APH04702.1	APH05295.1	A9C19_08035	A9C19_11305	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
APH04702.1	APH05296.1	A9C19_08035	A9C19_11310	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
APH05295.1	APH03568.1	A9C19_11305	A9C19_01700	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APH05295.1	APH04702.1	A9C19_11305	A9C19_08035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
APH05295.1	APH05296.1	A9C19_11305	A9C19_11310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
APH05295.1	APH05947.1	A9C19_11305	A9C19_15050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
APH05295.1	APH06533.1	A9C19_11305	A9C19_18375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	EDD domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
APH05296.1	APH03568.1	A9C19_11310	A9C19_01700	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
APH05296.1	APH04702.1	A9C19_11310	A9C19_08035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
APH05296.1	APH05295.1	A9C19_11310	A9C19_11305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
APH05296.1	APH05947.1	A9C19_11310	A9C19_15050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
APH05947.1	APH05295.1	A9C19_15050	A9C19_11305	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
APH05947.1	APH05296.1	A9C19_15050	A9C19_11310	Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.507
APH06366.1	APH06367.1	A9C19_17420	A9C19_17425	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
APH06366.1	APH06368.1	A9C19_17420	A9C19_17430	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.924
APH06367.1	APH06366.1	A9C19_17425	A9C19_17420	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963