STRINGSTRING
APH03883.1 APH03883.1 dbpA dbpA APH07190.1 APH07190.1 rpsR rpsR rpsF rpsF APH06783.1 APH06783.1 rpmH rpmH APH06318.1 APH06318.1 APH06361.1 APH06361.1 kynU kynU APH06541.1 APH06541.1 cshA cshA APH06626.1 APH06626.1 rpsI rpsI rplM rplM rplQ rplQ rpsK rpsK rpmD rpmD rpsE rpsE rplR rplR rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rpsC rpsC rpsS rpsS rplB rplB rplW rplW recF recF gyrB gyrB pdxS pdxS APH07184.1 APH07184.1 recR recR rnmV rnmV rplY rplY APH06713.1 APH06713.1 APH06697.1 APH06697.1 rplK rplK rplA rplA rplJ rplJ rplL rplL rpsG rpsG rpsJ rpsJ rplC rplC rpmJ rpmJ rplO rplO mtnW mtnW APH05714.1 APH05714.1 APH05761.1 APH05761.1 rpsN-2 rpsN-2 rpmE2 rpmE2 APH05959.1 APH05959.1 APH05961.1 APH05961.1 APH07135.1 APH07135.1 APH06054.1 APH06054.1 mtnB mtnB APH06264.1 APH06264.1 APH06291.1 APH06291.1 APH06315.1 APH06315.1 topB topB APH03330.1 APH03330.1 rpmE rpmE APH03438.1 APH03438.1 APH06900.1 APH06900.1 APH03457.1 APH03457.1 APH03465.1 APH03465.1 APH03482.1 APH03482.1 APH03485.1 APH03485.1 APH03583.1 APH03583.1 hpf hpf APH03655.1 APH03655.1 rpmG rpmG APH03727.1 APH03727.1 APH03774.1 APH03774.1 APH03789.1 APH03789.1 APH03955.1 APH03955.1 APH03962.1 APH03962.1 APH06948.1 APH06948.1 APH04003.1 APH04003.1 ezrA ezrA ackA ackA APH04095.1 APH04095.1 APH06962.1 APH06962.1 APH04123.1 APH04123.1 rpmI rpmI APH04149.1 APH04149.1 rplU rplU rpmA rpmA dtd dtd APH04273.1 APH04273.1 udk udk APH04314.1 APH04314.1 rpsT rpsT rpsU rpsU APH04342.1 APH04342.1 recO recO dnaG dnaG cshB cshB rpmG-2 rpmG-2 APH04417.1 APH04417.1 APH04463.1 APH04463.1 APH04560.1 APH04560.1 APH04566.1 APH04566.1 APH07001.1 APH07001.1 APH04581.1 APH04581.1 APH04592.1 APH04592.1 APH04602.1 APH04602.1 APH04637.1 APH04637.1 nth nth APH04744.1 APH04744.1 APH04811.1 APH04811.1 APH07027.1 APH07027.1 APH04884.1 APH04884.1 APH07032.1 APH07032.1 APH04925.1 APH04925.1 APH05018.1 APH05018.1 APH05086.1 APH05086.1 parE parE APH07049.1 APH07049.1 APH05169.1 APH05169.1 rpsO rpsO APH05218.1 APH05218.1 rpsB rpsB topA topA rpsP rpsP smc smc rpmB rpmB priA priA APH07070.1 APH07070.1 APH05333.1 APH05333.1 rpmF rpmF APH05417.1 APH05417.1 APH05424.1 APH05424.1 APH05485.1 APH05485.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APH03883.1RNA-binding protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
dbpARNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (481 aa)
APH07190.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (451 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (95 aa)
APH06783.1Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (285 aa)
rpmH50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
APH06318.1tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (326 aa)
APH06361.1Nitric oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. (374 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (423 aa)
APH06541.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (663 aa)
cshADEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. (503 aa)
APH06626.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (523 aa)
rpsI30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (130 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (145 aa)
rplQ50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpmD50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (165 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (103 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (87 aa)
rpmC50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (67 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (218 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (276 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (95 aa)
recFDNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (375 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (640 aa)
pdxSPyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (294 aa)
APH07184.1Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa)
rnmVRibonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (190 aa)
rplY50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (207 aa)
APH06713.1RNA-binding protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
APH06697.1tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (333 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (166 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (119 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (209 aa)
rpmJ50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa)
mtnW2,3-diketo-5-methylthiopentyl-1-phosphate enolase; Catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P); Belongs to the RuBisCO large chain family. Type IV subfamily. (413 aa)
APH05714.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
APH05761.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (300 aa)
rpsN-230S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (89 aa)
rpmE250S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
APH05959.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
APH05961.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
APH07135.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
APH06054.1CDP-abequose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
mtnBMethylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). (207 aa)
APH06264.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
APH06291.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)
APH06315.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
topBDNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (725 aa)
APH03330.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA. (66 aa)
APH03438.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
APH06900.1Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
APH03457.1Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
APH03465.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (239 aa)
APH03482.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
APH03485.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (137 aa)
APH03583.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
hpfRibosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (186 aa)
APH03655.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
rpmG50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)
APH03727.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (291 aa)
APH03774.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
APH03789.1Hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
APH03955.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (365 aa)
APH03962.1TIGR00266 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
APH06948.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
APH04003.1Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
ezrAHypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. (564 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (396 aa)
APH04095.1Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
APH06962.1Replication initiation and membrane attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
APH04123.1Primosomal protein DnaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
rpmI50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. (66 aa)
APH04149.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family. (104 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa)
rpmA50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. (96 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
APH04273.1Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
udkUridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
APH04314.1ComE operon protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
rpsU30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. (57 aa)
APH04342.1UDP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (250 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (605 aa)
cshBDEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. (438 aa)
rpmG-250S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)
APH04417.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
APH04463.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (566 aa)
APH04560.1ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (191 aa)
APH04566.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
APH07001.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
APH04581.130S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
APH04592.1DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (92 aa)
APH04602.1Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. (121 aa)
APH04637.1DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (218 aa)
APH04744.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
APH04811.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (222 aa)
APH07027.1Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
APH04884.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
APH07032.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
APH04925.1DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
APH05018.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (984 aa)
APH05086.1Helicase SNF; Derived by automated computational analysis using gene prediction method: Protein Homology. (1034 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. (655 aa)
APH07049.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
APH05169.1DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (720 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
APH05218.150S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (233 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (691 aa)
rpsP30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. (90 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1188 aa)
rpmB50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (62 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (804 aa)
APH07070.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
APH05333.1RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
rpmF50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
APH05417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
APH05424.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa)
APH05485.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
Your Current Organism:
Bacillus weihaiensis
NCBI taxonomy Id: 1547283
Other names: B. weihaiensis, Bacillus sp. Alg07, strain Alg07
Server load: low (16%) [HD]