STRINGSTRING
APH05424.1 APH05424.1 APH06874.1 APH06874.1 APH06867.1 APH06867.1 APH06866.1 APH06866.1 APH06854.1 APH06854.1 APH06834.1 APH06834.1 APH06822.1 APH06822.1 dbpA dbpA APH06806.1 APH06806.1 purA purA APH07190.1 APH07190.1 ychF ychF APH06782.1 APH06782.1 mnmE mnmE dnaA dnaA recF recF APH06759.1 APH06759.1 APH06758.1 APH06758.1 dnaX dnaX tmk tmk APH06745.1 APH06745.1 mfd mfd ftsH ftsH APH06692.1 APH06692.1 radA radA fusA fusA tuf tuf adk adk ecfA-3 ecfA-3 ecfA-2 ecfA-2 APH06614.1 APH06614.1 cshA cshA APH06557.1 APH06557.1 APH06554.1 APH06554.1 APH06529.1 APH06529.1 APH06508.1 APH06508.1 APH06482.1 APH06482.1 APH06462.1 APH06462.1 APH07158.1 APH07158.1 APH06402.1 APH06402.1 APH06394.1 APH06394.1 APH06378.1 APH06378.1 APH06377.1 APH06377.1 APH06374.1 APH06374.1 APH06367.1 APH06367.1 APH06364.1 APH06364.1 APH06324.1 APH06324.1 APH06316.1 APH06316.1 APH06280.1 APH06280.1 APH06278.1 APH06278.1 APH06277.1 APH06277.1 APH06264.1 APH06264.1 APH07150.1 APH07150.1 APH06242.1 APH06242.1 APH06237.1 APH06237.1 APH06215.1 APH06215.1 APH06179.1 APH06179.1 APH06166.1 APH06166.1 APH06149.1 APH06149.1 APH06089.1 APH06089.1 APH06070.1 APH06070.1 APH06067.1 APH06067.1 APH06040.1 APH06040.1 APH06032.1 APH06032.1 APH05997.1 APH05997.1 APH05986.1 APH05986.1 addB addB addA addA APH05975.1 APH05975.1 APH07136.1 APH07136.1 APH05918.1 APH05918.1 APH05917.1 APH05917.1 APH05880.1 APH05880.1 APH05873.1 APH05873.1 APH05850.1 APH05850.1 APH05834.1 APH05834.1 APH05828.1 APH05828.1 APH05827.1 APH05827.1 APH05821.1 APH05821.1 APH05766.1 APH05766.1 APH05755.1 APH05755.1 APH05733.1 APH05733.1 APH05693.1 APH05693.1 APH05611.1 APH05611.1 APH05468.1 APH05468.1 APH05452.1 APH05452.1 APH05451.1 APH05451.1 APH05447.1 APH05447.1 APH05433.1 APH05433.1 APH05429.1 APH05429.1 APH05397.1 APH05397.1 APH05392.1 APH05392.1 cysC cysC gmk gmk priA priA rsgA rsgA recG recG smc smc ftsY ftsY ffh ffh APH05277.1 APH05277.1 hslU hslU APH05258.1 APH05258.1 APH05241.1 APH05241.1 APH05240.1 APH05240.1 infB infB APH05199.1 APH05199.1 APH05196.1 APH05196.1 recA recA APH05164.1 APH05164.1 mutS mutS miaA miaA APH05157.1 APH05157.1 hflX hflX APH07049.1 APH07049.1 APH05091.1 APH05091.1 APH05086.1 APH05086.1 ecfA ecfA cobQ cobQ cbiA cbiA APH05062.1 APH05062.1 APH05059.1 APH05059.1 APH05057.1 APH05057.1 APH05054.1 APH05054.1 APH05046.1 APH05046.1 APH05018.1 APH05018.1 A9C19_09690 A9C19_09690 APH04982.1 APH04982.1 APH04925.1 APH04925.1 APH04919.1 APH04919.1 APH07031.1 APH07031.1 APH04829.1 APH04829.1 APH04799.1 APH04799.1 APH04776.1 APH04776.1 APH04744.1 APH04744.1 fhs fhs APH04667.1 APH04667.1 APH04658.1 APH04658.1 APH04651.1 APH04651.1 dinG dinG APH04591.1 APH04591.1 der der cmk cmk APH04566.1 APH04566.1 ureG ureG APH04493.1 APH04493.1 APH04492.1 APH04492.1 APH04482.1 APH04482.1 APH04478.1 APH04478.1 APH06987.1 APH06987.1 APH04463.1 APH04463.1 APH04444.1 APH04444.1 APH04431.1 APH04431.1 APH04430.1 APH04430.1 APH04417.1 APH04417.1 aroK aroK APH06983.1 APH06983.1 pstB pstB APH04362.1 APH04362.1 cshB cshB era era APH04339.1 APH04339.1 lepA lepA APH04317.1 APH04317.1 APH04306.1 APH04306.1 udk udk recD2 recD2 APH04273.1 APH04273.1 ruvB ruvB obg obg APH04234.1 APH04234.1 APH04220.1 APH04220.1 APH04219.1 APH04219.1 engB engB lon lon APH04196.1 APH04196.1 clpX clpX APH04177.1 APH04177.1 mutS2 mutS2 APH04123.1 APH04123.1 coaE coaE APH04049.1 APH04049.1 APH04025.1 APH04025.1 APH04015.1 APH04015.1 APH04009.1 APH04009.1 APH03998.1 APH03998.1 APH03988.1 APH03988.1 APH03970.1 APH03970.1 APH06944.1 APH06944.1 APH03949.1 APH03949.1 APH03782.1 APH03782.1 metN metN APH06925.1 APH06925.1 APH03747.1 APH03747.1 APH03729.1 APH03729.1 APH03724.1 APH03724.1 APH03659.1 APH03659.1 hprK hprK uvrA uvrA uvrB uvrB prfC prfC ftsE ftsE secA secA rbsA rbsA APH03570.1 APH03570.1 APH03535.1 APH03535.1 APH03527.1 APH03527.1 APH06904.1 APH06904.1 APH03469.1 APH03469.1 APH03451.1 APH03451.1 APH03438.1 APH03438.1 atpD atpD atpA atpA APH03377.1 APH03377.1 tdk tdk rho rho pyrG pyrG icmF icmF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APH05424.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa)
APH06874.1Type VII secretion protein EssC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1492 aa)
APH06867.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (677 aa)
APH06866.1Multidrug ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
APH06854.1Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
APH06834.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
APH06822.1Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
dbpARNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (481 aa)
APH06806.1Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (428 aa)
APH07190.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (451 aa)
ychFRedox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)
APH06782.1Sporulation initiation inhibitor Soj; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
mnmEtRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (461 aa)
dnaAChromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (450 aa)
recFDNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (375 aa)
APH06759.1Deoxycytidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
APH06758.1Deoxyguanosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (565 aa)
tmkdTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (209 aa)
APH06745.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1176 aa)
ftsHCell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (646 aa)
APH06692.1ATP-dependent Clp protease ATP-binding subunit ClpC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (813 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (457 aa)
fusATranslation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (692 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (217 aa)
ecfA-3Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (279 aa)
ecfA-2Energy-coupling factor ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (287 aa)
APH06614.1Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (353 aa)
cshADEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. (503 aa)
APH06557.1tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
APH06554.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
APH06529.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
APH06508.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
APH06482.1ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (740 aa)
APH06462.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
APH07158.1Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology. (709 aa)
APH06402.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
APH06394.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
APH06378.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
APH06377.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
APH06374.1Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (373 aa)
APH06367.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
APH06364.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)
APH06324.1Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
APH06316.1Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
APH06280.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1076 aa)
APH06278.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
APH06277.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
APH06264.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
APH07150.1Cell division protein ZipA; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
APH06242.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
APH06237.1Daunorubicin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
APH06215.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
APH06179.1Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
APH06166.1Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
APH06149.1Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
APH06089.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (370 aa)
APH06070.1Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
APH06067.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (992 aa)
APH06040.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
APH06032.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
APH05997.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
APH05986.1Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
addBHelicase-exonuclease AddAB subunit AddB; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily. (1163 aa)
addAHelicase-exonuclease AddAB subunit AddA; ATP-dependent DNA helicase. (1240 aa)
APH05975.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1133 aa)
APH07136.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
APH05918.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (347 aa)
APH05917.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (312 aa)
APH05880.1ATP-dependent DNA helicase Rep; Derived by automated computational analysis using gene prediction method: Protein Homology. (760 aa)
APH05873.1Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APH05850.1DNA packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
APH05834.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
APH05828.1Nickel import ATP-binding protein NikD; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
APH05827.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
APH05821.1Arsenical pump-driving ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
APH05766.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (314 aa)
APH05755.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
APH05733.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
APH05693.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
APH05611.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
APH05468.1Molybdopterin-guanine dinucleotide biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
APH05452.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
APH05451.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
APH05447.1Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
APH05433.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
APH05429.1Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
APH05397.1GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
APH05392.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
cysCAdenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (200 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (204 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (804 aa)
rsgARibosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (294 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (682 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1188 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (332 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (446 aa)
APH05277.1Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (286 aa)
hslUHslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (466 aa)
APH05258.1Flagellar protein export ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
APH05241.1Flagellar biosynthesis protein FlhF; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
APH05240.1Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (730 aa)
APH05199.1Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. (795 aa)
APH05196.1Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
recARecombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (345 aa)
APH05164.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (865 aa)
miaAtRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (312 aa)
APH05157.1Stage V sporulation protein K; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
hflXGTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (403 aa)
APH07049.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
APH05091.1Glycine betaine/L-proline ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
APH05086.1Helicase SNF; Derived by automated computational analysis using gene prediction method: Protein Homology. (1034 aa)
ecfAEnergy-coupling factor ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (273 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (503 aa)
cbiACobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (460 aa)
APH05062.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
APH05059.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
APH05057.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
APH05054.1cob(I)yrinic acid a,c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
APH05046.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (833 aa)
APH05018.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (984 aa)
A9C19_09690Fis family transcriptional regulator; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (751 aa)
APH04982.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (291 aa)
APH04925.1DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
APH04919.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (321 aa)
APH07031.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (328 aa)
APH04829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
APH04799.1DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (744 aa)
APH04776.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa)
APH04744.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
fhsFormate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family. (563 aa)
APH04667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1201 aa)
APH04658.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)
APH04651.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (763 aa)
dinGATP-dependent helicase DinG; 3'-5' exonuclease. (939 aa)
APH04591.1Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. (492 aa)
derRibosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (436 aa)
cmkCytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
APH04566.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
ureGUrease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (205 aa)
APH04493.1Urea ABC transporter ATP-binding subunit UrtE; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
APH04492.1Urea ABC transporter ATP-binding protein UrtD; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
APH04482.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
APH04478.1ATPase/protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
APH06987.1Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)
APH04463.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (566 aa)
APH04444.1Stage III sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
APH04431.1Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (322 aa)
APH04430.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (336 aa)
APH04417.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (170 aa)
APH06983.1Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
pstBPhosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (270 aa)
APH04362.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
cshBDEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. (438 aa)
eraGTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (302 aa)
APH04339.1Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
lepAElongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (607 aa)
APH04317.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
APH04306.1Ribosome biogenesis GTPase YqeH; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
udkUridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
recD2Hypothetical protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (788 aa)
APH04273.1Recombinase RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (334 aa)
obgGTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (427 aa)
APH04234.1Septum site-determining protein MinD; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
APH04220.1Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
APH04219.1Type II secretion system protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
engBYihA family ribosome biogenesis GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (194 aa)
lonEndopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (774 aa)
APH04196.1ATP-dependent protease LonB; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
clpXATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (421 aa)
APH04177.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (653 aa)
mutS2Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (786 aa)
APH04123.1Primosomal protein DnaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (199 aa)
APH04049.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. (841 aa)
APH04025.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
APH04015.1Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
APH04009.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
APH03998.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
APH03988.1Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
APH03970.1Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
APH06944.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
APH03949.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
APH03782.1Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (341 aa)
APH06925.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
APH03747.1Hypothetical protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (633 aa)
APH03729.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
APH03724.1Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
APH03659.1RNase adaptor protein RapZ; Displays ATPase and GTPase activities. (299 aa)
hprKHPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] (311 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (958 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (661 aa)
prfCPeptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (528 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (836 aa)
rbsAD-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (498 aa)
APH03570.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
APH03535.1Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
APH03527.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (550 aa)
APH06904.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
APH03469.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (517 aa)
APH03451.1Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
APH03438.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
atpDF0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (466 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (502 aa)
APH03377.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (326 aa)
tdkThymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (423 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (533 aa)
icmFmethylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1086 aa)
Your Current Organism:
Bacillus weihaiensis
NCBI taxonomy Id: 1547283
Other names: B. weihaiensis, Bacillus sp. Alg07, strain Alg07
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