STRINGSTRING
CSCA_0231 CSCA_0231 CSCA_0233 CSCA_0233 CSCA_0234 CSCA_0234 CSCA_0235 CSCA_0235 CSCA_0236 CSCA_0236 CSCA_0237 CSCA_0237 CSCA_1839 CSCA_1839 argB argB argC argC CSCA_2985 CSCA_2985 CSCA_2986 CSCA_2986 CSCA_2990 CSCA_2990 arcA arcA argH argH argG argG CSCA_4024 CSCA_4024 CSCA_4899 CSCA_4899 CSCA_5017 CSCA_5017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSCA_0231Diaminopropionate ammonia-lyase. (392 aa)
CSCA_0233Carbamoyltransferase YgeW; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (398 aa)
CSCA_0234Selenate reductase YgfK. (1005 aa)
CSCA_0235Selenium metabolism protein SsnA. (442 aa)
CSCA_0236M20/DapE family protein YgeY. (406 aa)
CSCA_0237Carbamate kinase; Belongs to the carbamate kinase family. (316 aa)
CSCA_1839Acetylornithine and succinylornithine aminotransferase. (412 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (299 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (345 aa)
CSCA_2985Carbamate kinase; Belongs to the carbamate kinase family. (312 aa)
CSCA_2986Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (333 aa)
CSCA_2990Ornithine carbamoyltransferase. (333 aa)
arcAArginine deiminase ArcA. (423 aa)
argHArgininosuccinate lyase. (438 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (401 aa)
CSCA_4024Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (332 aa)
CSCA_4899Peptidase M20. (355 aa)
CSCA_5017Carbamate kinase; Belongs to the carbamate kinase family. (314 aa)
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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