STRINGSTRING
CSCA_0762 CSCA_0762 CSCA_5251 CSCA_5251 CSCA_5119 CSCA_5119 CSCA_5043 CSCA_5043 CSCA_5039 CSCA_5039 CSCA_5021 CSCA_5021 CSCA_4813 CSCA_4813 CSCA_4435 CSCA_4435 CSCA_4324 CSCA_4324 CSCA_3596 CSCA_3596 CSCA_2576 CSCA_2576 CSCA_2558 CSCA_2558 CSCA_2488 CSCA_2488 CSCA_2385 CSCA_2385 CSCA_2350 CSCA_2350 CSCA_2072 CSCA_2072 CSCA_2043 CSCA_2043 CSCA_1904 CSCA_1904 CSCA_1878 CSCA_1878 CSCA_1764 CSCA_1764 CSCA_1695 CSCA_1695 CSCA_1300 CSCA_1300 CSCA_1188 CSCA_1188 CSCA_1167 CSCA_1167 CSCA_1018 CSCA_1018 CSCA_0581 CSCA_0581 CSCA_0510 CSCA_0510 CSCA_0486 CSCA_0486 CSCA_0354 CSCA_0354 CSCA_0218 CSCA_0218 CSCA_0065 CSCA_0065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSCA_0762Transcriptional regulator, GntR family with aminotransferase domain. (458 aa)
CSCA_5251Transcriptional regulator, GntR family. (126 aa)
CSCA_5119Transcriptional regulator, GntR family. (124 aa)
CSCA_5043Transcriptional regulator, GntR family with aminotransferase domain. (488 aa)
CSCA_5039TrkA-C domain protein. (218 aa)
CSCA_5021Transcriptional regulator, GntR family. (212 aa)
CSCA_4813Transcriptional regulator, GntR family with aminotransferase domain. (467 aa)
CSCA_4435Transcriptional regulator, GntR family with aminotransferase domain. (488 aa)
CSCA_4324Transcriptional regulator, GntR family. (308 aa)
CSCA_3596LacI family transcription regulator. (362 aa)
CSCA_2576Transcriptional regulator, GntR family. (128 aa)
CSCA_2558Transcriptional regulator, GntR family. (226 aa)
CSCA_2488GntR domain protein. (230 aa)
CSCA_2385Transcriptional regulator. (213 aa)
CSCA_2350Transcriptional regulator. (232 aa)
CSCA_2072Transcriptional regulator, GntR family. (228 aa)
CSCA_2043Regulatory protein GntR HTH. (235 aa)
CSCA_1904Transcriptional regulator, GntR family. (219 aa)
CSCA_1878Transcriptional regulator, GntR family with aminotransferase domain. (472 aa)
CSCA_1764Transcriptional regulator, GntR family with aminotransferase domain. (474 aa)
CSCA_1695Transcriptional regulator, GntR family with aminotransferase domain. (458 aa)
CSCA_1300Transcriptional regulator, GntR family. (121 aa)
CSCA_1188Regulatory protein GntR HTH. (374 aa)
CSCA_1167Transcriptional regulator, GntR family. (491 aa)
CSCA_1018Transcriptional regulator, GntR family with aminotransferase domain. (464 aa)
CSCA_0581Transcriptional regulator, GntR family. (468 aa)
CSCA_0510Transcriptional regulator, GntR family with aminotransferase domain. (475 aa)
CSCA_0486Transcriptional regulator, GntR family. (223 aa)
CSCA_0354GntR family transcriptional regulator. (233 aa)
CSCA_0218Transcriptional regulator, GntR family with aminotransferase domain. (446 aa)
CSCA_0065Transcriptional regulator. (211 aa)
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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