STRINGSTRING
AIT07882.1 AIT07882.1 AIT05291.1 AIT05291.1 AIT05292.1 AIT05292.1 AIT05619.1 AIT05619.1 AIT05620.1 AIT05620.1 AIT05779.1 AIT05779.1 AIT05780.1 AIT05780.1 AIT05860.1 AIT05860.1 AIT05861.1 AIT05861.1 AIT05862.1 AIT05862.1 AIT08002.1 AIT08002.1 nuoN nuoN AIT05865.1 AIT05865.1 AIT05866.1 AIT05866.1 nuoK nuoK AIT05868.1 AIT05868.1 nuoI nuoI nuoH nuoH AIT05871.1 AIT05871.1 AIT05872.1 AIT05872.1 AIT05873.1 AIT05873.1 AIT05874.1 AIT05874.1 AIT05875.1 AIT05875.1 AIT05876.1 AIT05876.1 AIT05877.1 AIT05877.1 nuoD nuoD nuoC nuoC nuoB nuoB nuoA nuoA ctaA ctaA AIT05967.1 AIT05967.1 AIT05968.1 AIT05968.1 AIT06024.1 AIT06024.1 AIT06284.1 AIT06284.1 AIT06485.1 AIT06485.1 AIT06486.1 AIT06486.1 AIT06487.1 AIT06487.1 AIT06588.1 AIT06588.1 hppA hppA AIT06725.1 AIT06725.1 AIT06823.1 AIT06823.1 AIT08177.1 AIT08177.1 AIT08179.1 AIT08179.1 AIT07000.1 AIT07000.1 AIT07001.1 AIT07001.1 AIT07002.1 AIT07002.1 AIT07003.1 AIT07003.1 AIT07004.1 AIT07004.1 AIT07005.1 AIT07005.1 AIT07517.1 AIT07517.1 AIT07518.1 AIT07518.1 AIT07519.1 AIT07519.1 ctaG ctaG ctaB ctaB AIT07525.1 AIT07525.1 AIT08295.1 AIT08295.1 AIT07810.1 AIT07810.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIT07882.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AIT05291.1NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
AIT05292.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (297 aa)
AIT05619.1Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AIT05620.1Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
AIT05779.1Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
AIT05780.1Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (836 aa)
AIT05860.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)
AIT05861.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
AIT05862.1RNA-metabolising metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
AIT08002.1Biotin--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (484 aa)
AIT05865.1NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)
AIT05866.1NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
AIT05868.1NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (203 aa)
nuoINADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (161 aa)
nuoHNADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (351 aa)
AIT05871.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (77 aa)
AIT05872.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (667 aa)
AIT05873.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
AIT05874.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (434 aa)
AIT05875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
AIT05876.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
AIT05877.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)
nuoDNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (403 aa)
nuoCNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (284 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (183 aa)
nuoANADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (124 aa)
ctaAHeme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (345 aa)
AIT05967.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
AIT05968.1Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
AIT06024.1Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (830 aa)
AIT06284.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (961 aa)
AIT06485.1Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
AIT06486.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (428 aa)
AIT06487.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (193 aa)
AIT06588.1Fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
hppAPyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (723 aa)
AIT06725.1Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
AIT06823.1Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)
AIT08177.1Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
AIT08179.1Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AIT07000.1Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
AIT07001.1Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
AIT07002.1Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (671 aa)
AIT07003.1Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
AIT07004.1Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
AIT07005.1Surfeit locus 1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
AIT07517.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
AIT07518.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AIT07519.1Cytochrome B562; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
ctaGCytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (188 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (301 aa)
AIT07525.1Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (553 aa)
AIT08295.1Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (379 aa)
AIT07810.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology. (945 aa)
Your Current Organism:
Sphingomonas taxi
NCBI taxonomy Id: 1549858
Other names: ATCC 55669, Erwinia taxi, S. taxi, strain STJ.EPI.H7
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