(5 nodes) Cationic antimicrobial peptide (CAMP) resistance network (Sphingomonas taxi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIT05993.1	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (411 aa)
	AIT05994.1	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1083 aa)
	AIT05995.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
	AIT06900.1	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1072 aa)
	AIT08189.1	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (393 aa)

Your Current Organism:

Sphingomonas taxi

NCBI taxonomy Id: 1549858
Other names: ATCC 55669, Erwinia taxi, S. taxi, strain STJ.EPI.H7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIT05993.1	AIT05994.1	MC45_05790	MC45_05795	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AIT05993.1	AIT05995.1	MC45_05790	MC45_05800	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AIT05993.1	AIT06900.1	MC45_05790	MC45_11535	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AIT05993.1	AIT08189.1	MC45_05790	MC45_11540	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.906
AIT05994.1	AIT05993.1	MC45_05795	MC45_05790	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.991
AIT05994.1	AIT05995.1	MC45_05795	MC45_05800	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AIT05994.1	AIT06900.1	MC45_05795	MC45_11535	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AIT05994.1	AIT08189.1	MC45_05795	MC45_11540	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.984
AIT05995.1	AIT05993.1	MC45_05800	MC45_05790	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.977
AIT05995.1	AIT05994.1	MC45_05800	MC45_05795	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AIT05995.1	AIT06900.1	MC45_05800	MC45_11535	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AIT05995.1	AIT08189.1	MC45_05800	MC45_11540	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.958
AIT06900.1	AIT05993.1	MC45_11535	MC45_05790	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.984
AIT06900.1	AIT05994.1	MC45_11535	MC45_05795	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AIT06900.1	AIT05995.1	MC45_11535	MC45_05800	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AIT06900.1	AIT08189.1	MC45_11535	MC45_11540	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.996
AIT08189.1	AIT05993.1	MC45_11540	MC45_05790	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.906
AIT08189.1	AIT05994.1	MC45_11540	MC45_05795	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AIT08189.1	AIT05995.1	MC45_11540	MC45_05800	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AIT08189.1	AIT06900.1	MC45_11540	MC45_11535	Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996