(6 nodes) Aldehyde oxidase/xanthine dehydrogenase, and Carboxylate reductase activity network (Sphingomonas taxi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIT05188.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AIT06824.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AIT06825.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (744 aa)
	AIT06826.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (730 aa)
	AIT07754.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (776 aa)
	AIT07755.1	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)

Your Current Organism:

Sphingomonas taxi

NCBI taxonomy Id: 1549858
Other names: ATCC 55669, Erwinia taxi, S. taxi, strain STJ.EPI.H7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIT05188.1	AIT06824.1	MC45_00675	MC45_11075	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIT05188.1	AIT06825.1	MC45_00675	MC45_11080	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIT05188.1	AIT06826.1	MC45_00675	MC45_11085	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIT05188.1	AIT07754.1	MC45_00675	MC45_16890	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIT05188.1	AIT07755.1	MC45_00675	MC45_16895	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AIT06824.1	AIT05188.1	MC45_11075	MC45_00675	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIT06824.1	AIT06825.1	MC45_11075	MC45_11080	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIT06824.1	AIT06826.1	MC45_11075	MC45_11085	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIT06824.1	AIT07754.1	MC45_11075	MC45_16890	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AIT06824.1	AIT07755.1	MC45_11075	MC45_16895	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AIT06825.1	AIT05188.1	MC45_11080	MC45_00675	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIT06825.1	AIT06824.1	MC45_11080	MC45_11075	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIT06825.1	AIT06826.1	MC45_11080	MC45_11085	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AIT06825.1	AIT07754.1	MC45_11080	MC45_16890	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AIT06825.1	AIT07755.1	MC45_11080	MC45_16895	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AIT06826.1	AIT05188.1	MC45_11085	MC45_00675	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIT06826.1	AIT06824.1	MC45_11085	MC45_11075	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIT06826.1	AIT06825.1	MC45_11085	MC45_11080	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AIT06826.1	AIT07754.1	MC45_11085	MC45_16890	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AIT06826.1	AIT07755.1	MC45_11085	MC45_16895	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991