STRINGSTRING
AIT05116.1 AIT05116.1 AIT05904.1 AIT05904.1 AIT06112.1 AIT06112.1 AIT08194.1 AIT08194.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIT05116.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
AIT05904.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AIT06112.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)
AIT08194.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
Your Current Organism:
Sphingomonas taxi
NCBI taxonomy Id: 1549858
Other names: ATCC 55669, Erwinia taxi, S. taxi, strain STJ.EPI.H7
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.