(6 nodes) Diol metabolic process, and Ethanolamine metabolic process network (Clostridium estertheticum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APC39582.1	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	pduC	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
	pduD	Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	pduE	Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	APC39586.1	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
	APC39587.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC39582.1	APC39586.1	A7L45_05625	A7L45_05645	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
APC39582.1	APC39587.1	A7L45_05625	A7L45_05650	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
APC39582.1	pduC	A7L45_05625	A7L45_05630	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
APC39582.1	pduD	A7L45_05625	A7L45_05635	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
APC39582.1	pduE	A7L45_05625	A7L45_05640	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
APC39586.1	APC39582.1	A7L45_05645	A7L45_05625	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
APC39586.1	APC39587.1	A7L45_05645	A7L45_05650	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
APC39586.1	pduC	A7L45_05645	A7L45_05630	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
APC39586.1	pduD	A7L45_05645	A7L45_05635	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
APC39586.1	pduE	A7L45_05645	A7L45_05640	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
APC39587.1	APC39582.1	A7L45_05650	A7L45_05625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
APC39587.1	APC39586.1	A7L45_05650	A7L45_05645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
APC39587.1	pduC	A7L45_05650	A7L45_05630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
APC39587.1	pduD	A7L45_05650	A7L45_05635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APC39587.1	pduE	A7L45_05650	A7L45_05640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
pduC	APC39582.1	A7L45_05630	A7L45_05625	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
pduC	APC39586.1	A7L45_05630	A7L45_05645	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
pduC	APC39587.1	A7L45_05630	A7L45_05650	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
pduC	pduD	A7L45_05630	A7L45_05635	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
pduC	pduE	A7L45_05630	A7L45_05640	Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999