(5 nodes) Galactose metabolism network (Clostridium estertheticum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	gatC	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	APC40127.1	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	APC40128.1	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	APC41563.1	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
	APC41564.1	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC40127.1	APC40128.1	A7L45_08615	A7L45_08620	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APC40127.1	APC41563.1	A7L45_08615	A7L45_16495	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
APC40127.1	APC41564.1	A7L45_08615	A7L45_16500	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
APC40127.1	gatC	A7L45_08615	A7L45_08610	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APC40128.1	APC40127.1	A7L45_08620	A7L45_08615	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
APC40128.1	APC41563.1	A7L45_08620	A7L45_16495	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
APC40128.1	APC41564.1	A7L45_08620	A7L45_16500	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
APC40128.1	gatC	A7L45_08620	A7L45_08610	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APC41563.1	APC40127.1	A7L45_16495	A7L45_08615	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
APC41563.1	APC40128.1	A7L45_16495	A7L45_08620	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
APC41563.1	APC41564.1	A7L45_16495	A7L45_16500	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APC41563.1	gatC	A7L45_16495	A7L45_08610	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
APC41564.1	APC40127.1	A7L45_16500	A7L45_08615	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
APC41564.1	APC40128.1	A7L45_16500	A7L45_08620	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
APC41564.1	APC41563.1	A7L45_16500	A7L45_16495	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APC41564.1	gatC	A7L45_16500	A7L45_08610	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
gatC	APC40127.1	A7L45_08610	A7L45_08615	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
gatC	APC40128.1	A7L45_08610	A7L45_08620	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
gatC	APC41563.1	A7L45_08610	A7L45_16495	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
gatC	APC41564.1	A7L45_08610	A7L45_16500	PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988