(6 nodes) Glucose permease domain IIB, and CAT RNA-binding domain network (Clostridium estertheticum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APC42540.1	Transcription antiterminator LicT; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	APC38961.1	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa)
	A7L45_15435	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
	APC41372.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (74 aa)
	APC41628.1	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
	APC42139.1	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A7L45_15435	APC38961.1	A7L45_15435	A7L45_02215	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
A7L45_15435	APC41372.1	A7L45_15435	A7L45_15440	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
A7L45_15435	APC41628.1	A7L45_15435	A7L45_16905	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
A7L45_15435	APC42139.1	A7L45_15435	A7L45_19790	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
A7L45_15435	APC42540.1	A7L45_15435	A7L45_02210	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription antiterminator LicT; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
APC38961.1	A7L45_15435	A7L45_02215	A7L45_15435	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
APC38961.1	APC41372.1	A7L45_02215	A7L45_15440	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.902
APC38961.1	APC41628.1	A7L45_02215	A7L45_16905	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
APC38961.1	APC42139.1	A7L45_02215	A7L45_19790	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APC38961.1	APC42540.1	A7L45_02215	A7L45_02210	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription antiterminator LicT; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
APC41372.1	A7L45_15435	A7L45_15440	A7L45_15435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APC41372.1	APC38961.1	A7L45_15440	A7L45_02215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
APC41372.1	APC41628.1	A7L45_15440	A7L45_16905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
APC41372.1	APC42139.1	A7L45_15440	A7L45_19790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
APC41372.1	APC42540.1	A7L45_15440	A7L45_02210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Transcription antiterminator LicT; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
APC41628.1	A7L45_15435	A7L45_16905	A7L45_15435	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
APC41628.1	APC38961.1	A7L45_16905	A7L45_02215	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
APC41628.1	APC41372.1	A7L45_16905	A7L45_15440	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
APC41628.1	APC42139.1	A7L45_16905	A7L45_19790	Glycosyl hydrolase family 20; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
APC42139.1	A7L45_15435	A7L45_19790	A7L45_15435	PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.	6-phospho-beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997