(10 nodes) Mixed, incl. Lactose metabolism, and Hexose transmembrane transport network (Clostridium estertheticum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APC38641.1	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	APC38642.1	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (309 aa)
	APC38643.1	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	APC38644.1	PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	fbp	Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)
	APC39518.1	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (309 aa)
	APC39899.1	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)
	APC39900.1	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (304 aa)
	APC40218.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	APC42105.1	Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC38641.1	APC38642.1	A7L45_00210	A7L45_00215	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.933
APC38641.1	APC38643.1	A7L45_00210	A7L45_00220	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
APC38641.1	APC38644.1	A7L45_00210	A7L45_00225	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
APC38641.1	APC39518.1	A7L45_00210	A7L45_05275	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.762
APC38641.1	APC39899.1	A7L45_00210	A7L45_07350	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
APC38641.1	APC39900.1	A7L45_00210	A7L45_07355	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.761
APC38642.1	APC38641.1	A7L45_00215	A7L45_00210	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
APC38642.1	APC38643.1	A7L45_00215	A7L45_00220	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
APC38642.1	APC38644.1	A7L45_00215	A7L45_00225	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APC38642.1	APC39518.1	A7L45_00215	A7L45_05275	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.903
APC38642.1	APC39899.1	A7L45_00215	A7L45_07350	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APC38642.1	APC39900.1	A7L45_00215	A7L45_07355	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.916
APC38642.1	APC40218.1	A7L45_00215	A7L45_09145	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
APC38642.1	APC42105.1	A7L45_00215	A7L45_19615	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
APC38642.1	fbp	A7L45_00215	A7L45_01440	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
APC38643.1	APC38641.1	A7L45_00220	A7L45_00210	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
APC38643.1	APC38642.1	A7L45_00220	A7L45_00215	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.946
APC38643.1	APC38644.1	A7L45_00220	A7L45_00225	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APC38643.1	APC39518.1	A7L45_00220	A7L45_05275	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.	0.808
APC38643.1	APC39899.1	A7L45_00220	A7L45_07350	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639