(11 nodes) Polysaccharide catabolic process, and Vacuole network (Clostridium estertheticum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APC39344.1	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (381 aa)
	APC39895.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (775 aa)
	APC40130.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (215 aa)
	APC40131.1	Arabinoxylan arabinofuranohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (510 aa)
	APC42636.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
	APC42637.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (938 aa)
	APC40138.1	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (511 aa)
	APC40149.1	Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family. (678 aa)
	APC41808.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (631 aa)
	APC41833.1	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	APC41835.1	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (320 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC39344.1	APC39895.1	A7L45_04355	A7L45_07330	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.744
APC39344.1	APC40130.1	A7L45_04355	A7L45_08635	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.765
APC39344.1	APC40131.1	A7L45_04355	A7L45_08640	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Arabinoxylan arabinofuranohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.703
APC39344.1	APC40138.1	A7L45_04355	A7L45_08685	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.689
APC39344.1	APC40149.1	A7L45_04355	A7L45_08745	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.	0.671
APC39344.1	APC41808.1	A7L45_04355	A7L45_17900	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.534
APC39344.1	APC41833.1	A7L45_04355	A7L45_18055	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
APC39344.1	APC41835.1	A7L45_04355	A7L45_18075	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.580
APC39344.1	APC42636.1	A7L45_04355	A7L45_08660	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
APC39344.1	APC42637.1	A7L45_04355	A7L45_08680	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
APC39895.1	APC39344.1	A7L45_07330	A7L45_04355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Arabinogalactan endo-1,4-beta-galactosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.744
APC39895.1	APC40130.1	A7L45_07330	A7L45_08635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family.	0.792
APC39895.1	APC40131.1	A7L45_07330	A7L45_08640	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Arabinoxylan arabinofuranohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.800
APC39895.1	APC40138.1	A7L45_07330	A7L45_08685	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.798
APC39895.1	APC40149.1	A7L45_07330	A7L45_08745	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.	0.838
APC39895.1	APC41808.1	A7L45_07330	A7L45_17900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.628
APC39895.1	APC41833.1	A7L45_07330	A7L45_18055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
APC39895.1	APC41835.1	A7L45_07330	A7L45_18075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.452
APC39895.1	APC42636.1	A7L45_07330	A7L45_08660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
APC39895.1	APC42637.1	A7L45_07330	A7L45_08680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763