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truA-3 truA-3 gpmA gpmA APC39818.1 APC39818.1 APC39335.1 APC39335.1 APC39333.1 APC39333.1 APC40894.1 APC40894.1 APC38875.1 APC38875.1 APC38848.1 APC38848.1 APC38725.1 APC38725.1 APC40479.1 APC40479.1 deoB deoB glmE glmE APC40014.1 APC40014.1 APC41579.1 APC41579.1 APC41580.1 APC41580.1 truA truA APC41578.1 APC41578.1 APC42520.1 APC42520.1 glmS glmS APC41426.1 APC41426.1 APC41325.1 APC41325.1 APC39336.1 APC39336.1 APC39365.1 APC39365.1 rbsD rbsD cbiC cbiC hemL hemL gpmI gpmI truA-2 truA-2 APC42242.1 APC42242.1 glmM glmM purE purE APC41102.1 APC41102.1 truB truB APC40780.1 APC40780.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
truA-3tRNA pseudouridine(38,39,40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (244 aa)
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (243 aa)
APC39818.1Cofactor-independent phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
APC39335.1D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
APC39333.1Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
APC40894.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (236 aa)
APC38875.116S rRNA pseudouridine(516) synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (238 aa)
APC38848.1Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
APC38725.123S rRNA pseudouridine synthase F; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (226 aa)
APC40479.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (393 aa)
glmEMethylaspartate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (485 aa)
APC40014.1MutL protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
APC41579.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa)
APC41580.1Ornithine aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
truAtRNA pseudouridine(38,39,40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (245 aa)
APC41578.1DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
APC42520.123S rRNA pseudouridine synthase F; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (249 aa)
glmSMethylaspartate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (143 aa)
APC41426.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RluA family. (317 aa)
APC41325.1RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (316 aa)
APC39336.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APC39365.1Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
rbsDD-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)
cbiCCatalyzes the interconversion of precorrin-8X and cobyrinic acid; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
hemLGlutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
gpmIPhosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
truA-2tRNA pseudouridine(38,39,40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (246 aa)
APC42242.1Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (449 aa)
purE5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (159 aa)
APC41102.1RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (303 aa)
truBtRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (289 aa)
APC40780.1Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)
Your Current Organism:
Clostridium estertheticum
NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum
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