STRINGSTRING
APC39420.1 APC39420.1 rhaA rhaA APC38828.1 APC38828.1 APC39156.1 APC39156.1 APC39393.1 APC39393.1 APC38827.1 APC38827.1 gpmI gpmI rhaD rhaD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APC39420.1Rhamnulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
rhaAL-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rhamnose isomerase family. (418 aa)
APC38828.1Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
APC39156.1Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
APC39393.1DUF4931 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
APC38827.1Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
gpmIPhosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa)
rhaDRhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (272 aa)
Your Current Organism:
Clostridium estertheticum
NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum
Server load: low (20%) [HD]