(5 nodes) L-lysine catabolic process to acetate network (Clostridium estertheticum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APC39333.1	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
	APC38848.1	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
	APC39329.1	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	APC39335.1	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
	APC39332.1	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)

Your Current Organism:

Clostridium estertheticum

NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APC38848.1	APC39329.1	A7L45_01580	A7L45_04275	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
APC38848.1	APC39332.1	A7L45_01580	A7L45_04290	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.597
APC38848.1	APC39333.1	A7L45_01580	A7L45_04295	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
APC38848.1	APC39335.1	A7L45_01580	A7L45_04310	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APC39329.1	APC38848.1	A7L45_04275	A7L45_01580	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.419
APC39329.1	APC39332.1	A7L45_04275	A7L45_04290	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
APC39329.1	APC39333.1	A7L45_04275	A7L45_04295	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
APC39329.1	APC39335.1	A7L45_04275	A7L45_04310	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APC39332.1	APC38848.1	A7L45_04290	A7L45_01580	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.597
APC39332.1	APC39329.1	A7L45_04290	A7L45_04275	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
APC39332.1	APC39333.1	A7L45_04290	A7L45_04295	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
APC39332.1	APC39335.1	A7L45_04290	A7L45_04310	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
APC39333.1	APC38848.1	A7L45_04295	A7L45_01580	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
APC39333.1	APC39329.1	A7L45_04295	A7L45_04275	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
APC39333.1	APC39332.1	A7L45_04295	A7L45_04290	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
APC39333.1	APC39335.1	A7L45_04295	A7L45_04310	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
APC39335.1	APC38848.1	A7L45_04310	A7L45_01580	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APC39335.1	APC39329.1	A7L45_04310	A7L45_04275	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
APC39335.1	APC39332.1	A7L45_04310	A7L45_04290	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-erythro-3,5-diaminohexanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
APC39335.1	APC39333.1	A7L45_04310	A7L45_04295	D-lysine 5,6-aminomutase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984