STRINGSTRING
APC39516.1 APC39516.1 birA birA APC38622.1 APC38622.1 APC38835.1 APC38835.1 APC42741.1 APC42741.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APC39516.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
birAbiotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (329 aa)
APC38622.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
APC38835.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (565 aa)
APC42741.1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
Your Current Organism:
Clostridium estertheticum
NCBI taxonomy Id: 1552
Other names: C. estertheticum subsp. estertheticum, Clostridium estertheticum subsp. estertheticum
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