STRINGSTRING
LIP_0068 LIP_0068 LIP_0069 LIP_0069 LIP_0165 LIP_0165 LIP_0166 LIP_0166 LIP_0217 LIP_0217 LIP_0218 LIP_0218 LIP_0291 LIP_0291 LIP_0292 LIP_0292 LIP_0879 LIP_0879 LIP_0880 LIP_0880 LIP_1061 LIP_1061 LIP_1062 LIP_1062 LIP_1204 LIP_1204 LIP_1207 LIP_1207 LIP_1208 LIP_1208 LIP_1403 LIP_1403 LIP_1404 LIP_1404 lgt lgt LIP_1408 LIP_1408 LIP_1409 LIP_1409 LIP_1410 LIP_1410 LIP_1719 LIP_1719 LIP_1721 LIP_1721 LIP_1908 LIP_1908 LIP_1909 LIP_1909 LIP_1910 LIP_1910 LIP_1911 LIP_1911 LIP_1912 LIP_1912 LIP_1913 LIP_1913 LIP_1914 LIP_1914 LIP_1915 LIP_1915 LIP_1916 LIP_1916 LIP_2688 LIP_2688 LIP_2689 LIP_2689 LIP_2690 LIP_2690 LIP_2849 LIP_2849 LIP_2850 LIP_2850 LIP_2851 LIP_2851 LIP_2858 LIP_2858 LIP_2859 LIP_2859 LIP_2860 LIP_2860 LIP_2861 LIP_2861 LIP_2918 LIP_2918 LIP_2934 LIP_2934 LIP_2935 LIP_2935 LIP_2976 LIP_2976 LIP_2977 LIP_2977 LIP_2978 LIP_2978 LIP_3133 LIP_3133 LIP_3134 LIP_3134 rsmI rsmI LIP_3184 LIP_3184 LIP_3186 LIP_3186 LIP_3187 LIP_3187 LIP_3188 LIP_3188 LIP_3189 LIP_3189 LIP_3228 LIP_3228 LIP_3229 LIP_3229 LIP_3406 LIP_3406 LIP_3407 LIP_3407 LIP_3417 LIP_3417 LIP_3418 LIP_3418 LIP_3419 LIP_3419 LIP_3420 LIP_3420 LIP_3445 LIP_3445 LIP_3446 LIP_3446 LIP_3463 LIP_3463 LIP_3464 LIP_3464
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_0068LytTR family transcriptional regulator. (264 aa)
LIP_0069Histidine kinase. (449 aa)
LIP_0165Transcriptional regulator. (252 aa)
LIP_0166Hypothetical protein. (545 aa)
LIP_0217Hypothetical protein. (445 aa)
LIP_0218LuxR family transcriptional regulator. (216 aa)
LIP_0291Chemotaxis protein CheY. (227 aa)
LIP_0292Hypothetical protein. (663 aa)
LIP_0879Histidine kinase. (483 aa)
LIP_0880PhoB family transcriptional regulator. (226 aa)
LIP_1061Periplasmic sensor signal transduction histidine kinase. (471 aa)
LIP_1062LuxR family transcriptional regulator. (223 aa)
LIP_1204Transcriptional regulator. (244 aa)
LIP_1207Transcriptional regulator. (231 aa)
LIP_1208Histidine kinase. (564 aa)
LIP_1403Chemotaxis protein CheY. (229 aa)
LIP_1404Chemotaxis protein CheY. (236 aa)
lgtProlipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (278 aa)
LIP_1408LuxR family transcriptional regulator. (219 aa)
LIP_1409Hypothetical protein. (487 aa)
LIP_1410Hypothetical protein. (75 aa)
LIP_1719Hypothetical protein. (497 aa)
LIP_1721Chemotaxis protein CheY. (224 aa)
LIP_1908Gluconate permease. (453 aa)
LIP_19094-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family. (352 aa)
LIP_1910Hypothetical protein. (468 aa)
LIP_1911DeoR family transcriptional regulator. (263 aa)
LIP_1912Hypothetical protein. (639 aa)
LIP_1913Transcriptional regulator. (227 aa)
LIP_1914Hypothetical protein. (216 aa)
LIP_1915Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (346 aa)
LIP_1916Hypothetical protein. (146 aa)
LIP_2688MerR family transcriptional regulator. (118 aa)
LIP_2689LuxR family transcriptional regulator. (141 aa)
LIP_2690Two-component sensor histidine kinase. (621 aa)
LIP_2849LuxR family transcriptional regulator. (211 aa)
LIP_2850LuxR family transcriptional regulator. (218 aa)
LIP_2851LuxR family transcriptional regulator. (213 aa)
LIP_2858Hypothetical protein. (254 aa)
LIP_2859LuxR family transcriptional regulator. (227 aa)
LIP_2860Hypothetical protein. (1396 aa)
LIP_2861Hypothetical protein. (210 aa)
LIP_2918Histidine kinase. (443 aa)
LIP_2934Signal transduction histidine kinase. (516 aa)
LIP_2935Transcriptional regulator. (233 aa)
LIP_2976LuxR family transcriptional regulator. (162 aa)
LIP_2977Chemotaxis protein CheY. (268 aa)
LIP_2978Histidine kinase. (411 aa)
LIP_3133Histidine kinase. (594 aa)
LIP_3134PhoP family transcriptional regulator. (245 aa)
rsmI16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (289 aa)
LIP_3184ATPase AAA. (509 aa)
LIP_3186Hypothetical protein. (117 aa)
LIP_3187Hypothetical protein. (464 aa)
LIP_3188Histidine kinase. (482 aa)
LIP_3189Transcriptional regulator. (228 aa)
LIP_3228LuxR family transcriptional regulator. (222 aa)
LIP_3229Histidine kinase. (559 aa)
LIP_3406Histidine kinase. (513 aa)
LIP_3407Transcriptional regulator. (222 aa)
LIP_3417LuxR family transcriptional regulator. (198 aa)
LIP_3418Hypothetical protein. (142 aa)
LIP_3419Histidine kinase. (363 aa)
LIP_3420LytTR family transcriptional regulator. (241 aa)
LIP_3445Chemotaxis protein CheY. (246 aa)
LIP_3446Histidine kinase. (379 aa)
LIP_3463Multi-sensor signal transduction histidine kinase. (488 aa)
LIP_3464LuxR family transcriptional regulator. (226 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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