STRINGSTRING
LIP_0048 LIP_0048 LIP_0110 LIP_0110 argH argH LIP_0333 LIP_0333 LIP_0383 LIP_0383 LIP_0384 LIP_0384 LIP_0385 LIP_0385 LIP_0386 LIP_0386 LIP_0477 LIP_0477 LIP_0519 LIP_0519 LIP_0520 LIP_0520 LIP_0525 LIP_0525 LIP_0526 LIP_0526 LIP_0527 LIP_0527 LIP_0529 LIP_0529 LIP_0530 LIP_0530 LIP_0531 LIP_0531 LIP_0573 LIP_0573 LIP_0574 LIP_0574 LIP_0575 LIP_0575 LIP_0576 LIP_0576 LIP_0577 LIP_0577 LIP_0578 LIP_0578 LIP_0607 LIP_0607 LIP_0632 LIP_0632 LIP_0633 LIP_0633 LIP_0634 LIP_0634 LIP_0635 LIP_0635 LIP_0637 LIP_0637 LIP_0638 LIP_0638 LIP_0639 LIP_0639 LIP_0640 LIP_0640 LIP_0674 LIP_0674 LIP_0675 LIP_0675 LIP_0676 LIP_0676 LIP_0677 LIP_0677 LIP_0717 LIP_0717 LIP_0718 LIP_0718 LIP_0719 LIP_0719 LIP_0720 LIP_0720 LIP_0721 LIP_0721 LIP_0722 LIP_0722 LIP_0723 LIP_0723 LIP_0875 LIP_0875 LIP_0876 LIP_0876 LIP_0877 LIP_0877 LIP_0878 LIP_0878 LIP_0939 LIP_0939 LIP_0940 LIP_0940 LIP_0941 LIP_0941 LIP_0942 LIP_0942 LIP_0943 LIP_0943 LIP_0944 LIP_0944 LIP_0945 LIP_0945 LIP_1011 LIP_1011 LIP_1012 LIP_1012 LIP_1013 LIP_1013 LIP_1014 LIP_1014 LIP_1047 LIP_1047 LIP_1048 LIP_1048 LIP_1049 LIP_1049 argC argC argJ argJ argB argB LIP_1245 LIP_1245 argG argG argH-2 argH-2 LIP_1251 LIP_1251 LIP_1371 LIP_1371 LIP_1421 LIP_1421 LIP_1422 LIP_1422 LIP_1423 LIP_1423 LIP_1428 LIP_1428 LIP_1429 LIP_1429 LIP_1473 LIP_1473 LIP_1474 LIP_1474 LIP_1475 LIP_1475 LIP_1503 LIP_1503 LIP_1504 LIP_1504 LIP_1505 LIP_1505 LIP_1506 LIP_1506 LIP_1507 LIP_1507 LIP_1534 LIP_1534 LIP_1539 LIP_1539 LIP_1701 LIP_1701 LIP_1722 LIP_1722 LIP_1723 LIP_1723 LIP_1724 LIP_1724 speH speH LIP_1765 LIP_1765 LIP_1841 LIP_1841 LIP_1842 LIP_1842 LIP_1843 LIP_1843 LIP_2024 LIP_2024 LIP_2025 LIP_2025 LIP_2026 LIP_2026 LIP_2084 LIP_2084 LIP_2085 LIP_2085 LIP_2086 LIP_2086 LIP_2087 LIP_2087 LIP_2088 LIP_2088 LIP_2089 LIP_2089 LIP_2090 LIP_2090 LIP_2132 LIP_2132 LIP_2133 LIP_2133 LIP_2134 LIP_2134 LIP_2136 LIP_2136 LIP_2137 LIP_2137 LIP_2138 LIP_2138 LIP_2154 LIP_2154 LIP_2155 LIP_2155 LIP_2156 LIP_2156 LIP_2157 LIP_2157 LIP_2158 LIP_2158 LIP_2160 LIP_2160 LIP_2228 LIP_2228 LIP_2229 LIP_2229 LIP_2230 LIP_2230 LIP_2329 LIP_2329 LIP_2346 LIP_2346 LIP_2347 LIP_2347 LIP_2348 LIP_2348 mtnA mtnA LIP_2459 LIP_2459 LIP_2460 LIP_2460 LIP_2461 LIP_2461 argR argR LIP_2714 LIP_2714 LIP_2764 LIP_2764 LIP_2765 LIP_2765 LIP_2766 LIP_2766 LIP_2794 LIP_2794 LIP_2795 LIP_2795 LIP_2796 LIP_2796 LIP_2797 LIP_2797 LIP_2829 LIP_2829 LIP_2953 LIP_2953 LIP_2954 LIP_2954 LIP_2979 LIP_2979 LIP_2981 LIP_2981 LIP_2982 LIP_2982 LIP_2983 LIP_2983 metK metK LIP_2990 LIP_2990 LIP_3025 LIP_3025 LIP_3026 LIP_3026 LIP_3027 LIP_3027 LIP_3028 LIP_3028 LIP_3066 LIP_3066 LIP_3067 LIP_3067 LIP_3136 LIP_3136 LIP_3148 LIP_3148 speE speE LIP_3150 LIP_3150 LIP_3185 LIP_3185 LIP_3220 LIP_3220 LIP_3221 LIP_3221 LIP_3363 LIP_3363 LIP_3364 LIP_3364 LIP_3365 LIP_3365 LIP_3400 LIP_3400 LIP_3401 LIP_3401 metN metN LIP_3427 LIP_3427 LIP_3505 LIP_3505 LIP_3506 LIP_3506 LIP_3507 LIP_3507 LIP_3508 LIP_3508 cobT cobT LIP_3510 LIP_3510 LIP_3511 LIP_3511 LIP_3512 LIP_3512 LIP_3513 LIP_3513 cbiA cbiA LIP_3515 LIP_3515 cobD cobD cobS cobS LIP_3518 LIP_3518 LIP_3519 LIP_3519 cobQ cobQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_0048Pyruvoyl-dependent arginine decarboxylase. (166 aa)
LIP_0110Amino acid ABC transporter ATPase. (261 aa)
argHArgininosuccinate lyase. (512 aa)
LIP_0333Dioxygenase; Belongs to the nlpA lipoprotein family. (283 aa)
LIP_0383Hypothetical protein. (206 aa)
LIP_0384ABC transporter. (457 aa)
LIP_0385Hypothetical protein. (201 aa)
LIP_0386Hypothetical protein. (237 aa)
LIP_0477DNA methyltransferase. (464 aa)
LIP_0519Glutamine ABC transporter permease. (216 aa)
LIP_0520Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
LIP_0525Peptide ABC transporter permease. (301 aa)
LIP_0526Glutathione ABC transporter permease. (306 aa)
LIP_0527Peptide ABC transporter substrate-binding protein. (546 aa)
LIP_0529Glutathione ABC transporter permease GsiD. (296 aa)
LIP_0530Peptide ABC transporter. (324 aa)
LIP_0531ABC transporter substrate-binding protein. (506 aa)
LIP_0573Hypothetical protein. (426 aa)
LIP_0574Hypothetical protein. (746 aa)
LIP_0575Hypothetical protein. (822 aa)
LIP_0576Peptide ABC transporter permease. (351 aa)
LIP_0577Hypothetical protein. (483 aa)
LIP_0578Glutathione ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (663 aa)
LIP_0607ABC transporter substrate-binding protein. (504 aa)
LIP_0632ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (713 aa)
LIP_0633Peptide ABC transporter permease. (272 aa)
LIP_0634Peptide ABC transporter permease. (318 aa)
LIP_0635Peptide ABC transporter substrate-binding protein. (540 aa)
LIP_0637Membrane protein. (91 aa)
LIP_0638Cobalamin biosynthesis protein CbiM. (218 aa)
LIP_0639Cobalt ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (321 aa)
LIP_0640Cobalt ABC transporter permease. (251 aa)
LIP_0674Amino acid ABC transporter substrate-binding protein. (341 aa)
LIP_0675Polar amino acid ABC transporter permease. (404 aa)
LIP_0676Amine acid ABC transporter permease. (335 aa)
LIP_0677Polar amino acid ABC transporter ATP-binding protein. (262 aa)
LIP_0717Hypothetical protein. (132 aa)
LIP_0718Hypothetical protein. (201 aa)
LIP_0719Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (334 aa)
LIP_0720Peptide ABC transporter ATPase; Belongs to the ABC transporter superfamily. (323 aa)
LIP_0721ABC transporter permease. (309 aa)
LIP_0722ABC transporter permease. (392 aa)
LIP_0723ABC transporter substrate-binding protein. (628 aa)
LIP_0875Cobalt ABC transporter permease. (256 aa)
LIP_0876Cobalt ABC transporter ATP-binding protein. (283 aa)
LIP_0877Cobalt ABC transporter ATP-binding protein. (272 aa)
LIP_0878Hypothetical protein. (109 aa)
LIP_0939Hypothetical protein. (87 aa)
LIP_0940ABC transporter substrate-binding protein. (568 aa)
LIP_0941Peptide ABC transporter permease. (353 aa)
LIP_0942ABC transporter permease. (278 aa)
LIP_0943Peptide ABC transporter ATPase; Belongs to the ABC transporter superfamily. (355 aa)
LIP_0944Peptide ABC transporter ATPase. (266 aa)
LIP_0945Hypothetical protein. (562 aa)
LIP_1011Iron permease. (517 aa)
LIP_1012ABC transporter substrate-binding protein. (351 aa)
LIP_1013ABC transporter. (568 aa)
LIP_1014Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (405 aa)
LIP_1047Peptide ABC transporter permease. (309 aa)
LIP_1048Peptide ABC transporter permease. (351 aa)
LIP_1049ABC transporter substrate-binding protein. (524 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (340 aa)
argJOrnithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (405 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (296 aa)
LIP_1245Acetylornithine aminotransferase. (432 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)
argH-2Argininosuccinate lyase. (459 aa)
LIP_1251Hypothetical protein. (140 aa)
LIP_1371Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (327 aa)
LIP_1421Peptide ABC transporter substrate-binding protein. (506 aa)
LIP_1422Peptide ABC transporter permease. (322 aa)
LIP_1423Peptide ABC transporter permease. (312 aa)
LIP_14285'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. (290 aa)
LIP_1429Hypothetical protein. (87 aa)
LIP_1473ABC transporter. (178 aa)
LIP_1474ABC transporter. (595 aa)
LIP_1475Cobalt transporter. (266 aa)
LIP_1503Peptide ABC transporter substrate-binding protein. (559 aa)
LIP_1504Glutathione ABC transporter permease. (308 aa)
LIP_1505Peptide ABC transporter permease. (306 aa)
LIP_1506Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)
LIP_1507Peptide ABC transporter substrate-binding protein; Belongs to the ABC transporter superfamily. (368 aa)
LIP_1534Carbamate kinase; Belongs to the carbamate kinase family. (312 aa)
LIP_1539ABC transporter substrate-binding protein. (301 aa)
LIP_1701Alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family. (211 aa)
LIP_1722Peptide ABC transporter substrate-binding protein. (515 aa)
LIP_1723Peptide ABC transporter permease. (342 aa)
LIP_1724Peptide ABC transporter permease. (290 aa)
speHS-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (133 aa)
LIP_1765Putrescine--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (471 aa)
LIP_1841ABC transporter permease. (351 aa)
LIP_1842ABC transporter substrate-binding protein. (323 aa)
LIP_1843ABC transporter substrate-binding protein. (576 aa)
LIP_2024Peptide ABC transporter substrate-binding protein. (531 aa)
LIP_2025Peptide ABC transporter permease. (314 aa)
LIP_2026Peptide ABC transporter permease. (301 aa)
LIP_2084Guanidinobutyrase; Belongs to the arginase family. (315 aa)
LIP_2085Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
LIP_2086Putrescine--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
LIP_2087Polyamine ABC transporter substrate-binding protein. (350 aa)
LIP_2088ABC transporter permease. (262 aa)
LIP_2089Spermidine/putrescine ABC transporter permease. (301 aa)
LIP_2090Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily. (360 aa)
LIP_2132Peptide ABC transporter permease. (304 aa)
LIP_2133Glutathione ABC transporter permease. (315 aa)
LIP_2134Hypothetical protein. (515 aa)
LIP_2136Hypothetical protein. (343 aa)
LIP_2137Peptide ABC transporter permease. (346 aa)
LIP_2138Peptide ABC transporter substrate-binding protein. (489 aa)
LIP_2154IclR family transcriptional regulator. (271 aa)
LIP_2155Peptide ABC transporter permease. (316 aa)
LIP_2156Peptide ABC transporter permease. (302 aa)
LIP_2157Oligopeptide-binding protein AppA. (534 aa)
LIP_2158Hypothetical protein. (487 aa)
LIP_2160Peptidase M28. (599 aa)
LIP_2228Diguanylate cyclase. (296 aa)
LIP_2229Glutathione ABC transporter permease. (306 aa)
LIP_2230Peptide ABC transporter substrate-binding protein. (530 aa)
LIP_2329Acetylornithine deacetylase. (422 aa)
LIP_2346Glutathione ABC transporter permease GsiD. (282 aa)
LIP_2347Peptide ABC transporter. (312 aa)
LIP_2348Hypothetical protein. (516 aa)
mtnAMethylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (347 aa)
LIP_2459Peptide ABC transporter permease. (371 aa)
LIP_2460ABC transporter permease. (323 aa)
LIP_2461ABC transporter substrate-binding protein. (592 aa)
argRArginine repressor ArgR; Regulates arginine biosynthesis genes. (169 aa)
LIP_2714Arginine deiminase. (401 aa)
LIP_2764ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (395 aa)
LIP_2765Membrane protein. (575 aa)
LIP_2766Hypothetical protein. (362 aa)
LIP_2794ABC transporter substrate-binding protein. (309 aa)
LIP_2795Hypothetical protein. (231 aa)
LIP_2796Corrinoid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
LIP_2797ABC transporter. (275 aa)
LIP_2829Fatty acid-binding protein DegV. (277 aa)
LIP_2953Glutamine ABC transporter permease. (233 aa)
LIP_2954Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family. (251 aa)
LIP_29795'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. (265 aa)
LIP_2981Hypothetical protein. (162 aa)
LIP_2982Hypothetical protein. (612 aa)
LIP_2983Dolichyl-phosphate mannose synthase. (258 aa)
metKS-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (408 aa)
LIP_2990Hypothetical protein. (297 aa)
LIP_3025Biotin synthase. (183 aa)
LIP_3026Cobalt ABC transporter ATP-binding protein. (291 aa)
LIP_3027Cobalt ABC transporter ATP-binding protein. (294 aa)
LIP_3028Transporter. (248 aa)
LIP_3066ABC transporter. (242 aa)
LIP_3067Hypothetical protein. (683 aa)
LIP_3136cob(I)yrinic acid a c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (201 aa)
LIP_3148Agmatinase; Belongs to the arginase family. (289 aa)
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (279 aa)
LIP_3150Pyruvoyl-dependent arginine decarboxylase. (152 aa)
LIP_3185Arginine decarboxylase. (424 aa)
LIP_3220Peptide ABC transporter permease. (272 aa)
LIP_3221Peptide ABC transporter. (314 aa)
LIP_3363ABC transporter; Belongs to the ABC transporter superfamily. (373 aa)
LIP_3364Iron ABC transporter permease. (530 aa)
LIP_3365Iron ABC transporter substrate-binding protein. (341 aa)
LIP_3400Methionine ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family. (279 aa)
LIP_3401Methionine ABC transporter permease. (219 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)
LIP_3427Transporter. (231 aa)
LIP_3505Hypothetical protein. (183 aa)
LIP_3506Hypothetical protein. (249 aa)
LIP_3507Hypothetical protein. (224 aa)
LIP_3508Radical SAM protein. (340 aa)
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (357 aa)
LIP_3510ABC transporter. (271 aa)
LIP_3511Iron ABC transporter substrate-binding protein. (314 aa)
LIP_3512Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (359 aa)
LIP_3513Cobinamide adenolsyltransferase. (170 aa)
cbiACobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (508 aa)
LIP_3515Cobinamide kinase. (213 aa)
cobDCobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (332 aa)
cobSCobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (272 aa)
LIP_3518GHMP kinase. (164 aa)
LIP_3519Histidinol-phosphate aminotransferase. (381 aa)
cobQCobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (504 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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