STRINGSTRING
LIP_0048 LIP_0048 LIP_0110 LIP_0110 argH argH LIP_0519 LIP_0519 LIP_0520 LIP_0520 LIP_0674 LIP_0674 LIP_0675 LIP_0675 LIP_0676 LIP_0676 LIP_0677 LIP_0677 LIP_1012 LIP_1012 LIP_1013 LIP_1013 LIP_1014 LIP_1014 argC argC argJ argJ argB argB LIP_1245 LIP_1245 argG argG argH-2 argH-2 LIP_1371 LIP_1371 LIP_1534 LIP_1534 LIP_1765 LIP_1765 LIP_2084 LIP_2084 LIP_2085 LIP_2085 LIP_2086 LIP_2086 LIP_2087 LIP_2087 LIP_2088 LIP_2088 LIP_2089 LIP_2089 LIP_2090 LIP_2090 LIP_2329 LIP_2329 argR argR LIP_2714 LIP_2714 LIP_2764 LIP_2764 LIP_2765 LIP_2765 LIP_2766 LIP_2766 LIP_2953 LIP_2953 LIP_2954 LIP_2954 LIP_3066 LIP_3066 LIP_3067 LIP_3067 LIP_3148 LIP_3148 LIP_3150 LIP_3150 LIP_3185 LIP_3185 LIP_3363 LIP_3363 LIP_3364 LIP_3364 LIP_3365 LIP_3365
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_0048Pyruvoyl-dependent arginine decarboxylase. (166 aa)
LIP_0110Amino acid ABC transporter ATPase. (261 aa)
argHArgininosuccinate lyase. (512 aa)
LIP_0519Glutamine ABC transporter permease. (216 aa)
LIP_0520Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
LIP_0674Amino acid ABC transporter substrate-binding protein. (341 aa)
LIP_0675Polar amino acid ABC transporter permease. (404 aa)
LIP_0676Amine acid ABC transporter permease. (335 aa)
LIP_0677Polar amino acid ABC transporter ATP-binding protein. (262 aa)
LIP_1012ABC transporter substrate-binding protein. (351 aa)
LIP_1013ABC transporter. (568 aa)
LIP_1014Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (405 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (340 aa)
argJOrnithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (405 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (296 aa)
LIP_1245Acetylornithine aminotransferase. (432 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)
argH-2Argininosuccinate lyase. (459 aa)
LIP_1371Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (327 aa)
LIP_1534Carbamate kinase; Belongs to the carbamate kinase family. (312 aa)
LIP_1765Putrescine--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (471 aa)
LIP_2084Guanidinobutyrase; Belongs to the arginase family. (315 aa)
LIP_2085Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
LIP_2086Putrescine--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
LIP_2087Polyamine ABC transporter substrate-binding protein. (350 aa)
LIP_2088ABC transporter permease. (262 aa)
LIP_2089Spermidine/putrescine ABC transporter permease. (301 aa)
LIP_2090Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily. (360 aa)
LIP_2329Acetylornithine deacetylase. (422 aa)
argRArginine repressor ArgR; Regulates arginine biosynthesis genes. (169 aa)
LIP_2714Arginine deiminase. (401 aa)
LIP_2764ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (395 aa)
LIP_2765Membrane protein. (575 aa)
LIP_2766Hypothetical protein. (362 aa)
LIP_2953Glutamine ABC transporter permease. (233 aa)
LIP_2954Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family. (251 aa)
LIP_3066ABC transporter. (242 aa)
LIP_3067Hypothetical protein. (683 aa)
LIP_3148Agmatinase; Belongs to the arginase family. (289 aa)
LIP_3150Pyruvoyl-dependent arginine decarboxylase. (152 aa)
LIP_3185Arginine decarboxylase. (424 aa)
LIP_3363ABC transporter; Belongs to the ABC transporter superfamily. (373 aa)
LIP_3364Iron ABC transporter permease. (530 aa)
LIP_3365Iron ABC transporter substrate-binding protein. (341 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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