STRINGSTRING
LIP_3539 LIP_3539 LIP_0040 LIP_0040 LIP_0043 LIP_0043 LIP_0104 LIP_0104 LIP_0105 LIP_0105 LIP_0106 LIP_0106 LIP_0108 LIP_0108 LIP_0172 LIP_0172 LIP_0244 LIP_0244 LIP_0274 LIP_0274 LIP_0348 LIP_0348 LIP_0408 LIP_0408 LIP_0520 LIP_0520 LIP_0638 LIP_0638 LIP_0640 LIP_0640 LIP_0661 LIP_0661 LIP_0674 LIP_0674 LIP_0714 LIP_0714 LIP_0735 LIP_0735 LIP_0736 LIP_0736 LIP_0776 LIP_0776 LIP_0793 LIP_0793 LIP_0854 LIP_0854 LIP_1011 LIP_1011 LIP_1087 LIP_1087 LIP_1109 LIP_1109 LIP_1180 LIP_1180 hppA hppA LIP_1397 LIP_1397 LIP_1493 LIP_1493 LIP_1518 LIP_1518 LIP_1583 LIP_1583 LIP_1654 LIP_1654 LIP_1718 LIP_1718 LIP_1789 LIP_1789 LIP_1825 LIP_1825 LIP_1832 LIP_1832 LIP_1833 LIP_1833 LIP_1834 LIP_1834 LIP_1907 LIP_1907 LIP_1908 LIP_1908 LIP_1960 LIP_1960 LIP_1961 LIP_1961 LIP_1978 LIP_1978 LIP_1980 LIP_1980 LIP_2258 LIP_2258 LIP_2261 LIP_2261 LIP_2502 LIP_2502 crcB crcB crcB-2 crcB-2 LIP_2687 LIP_2687 LIP_2697 LIP_2697 LIP_2698 LIP_2698 LIP_2749 LIP_2749 LIP_2753 LIP_2753 LIP_2817 LIP_2817 LIP_2880 LIP_2880 LIP_2938 LIP_2938 LIP_2954 LIP_2954 LIP_2995 LIP_2995 LIP_3025 LIP_3025 pstB pstB LIP_3038 LIP_3038 atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH atpF atpF LIP_3091 LIP_3091 atpB atpB LIP_3108 LIP_3108 pstB-2 pstB-2 LIP_3225 LIP_3225 LIP_3319 LIP_3319 LIP_3345 LIP_3345 LIP_3351 LIP_3351 LIP_3353 LIP_3353 LIP_3368 LIP_3368 LIP_3384 LIP_3384 LIP_3399 LIP_3399 metN metN LIP_3456 LIP_3456 LIP_3461 LIP_3461 LIP_3469 LIP_3469 LIP_3470 LIP_3470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_3539Ammonium transporter. (426 aa)
LIP_0040Chloride channel protein. (613 aa)
LIP_0043Chloride channel protein. (576 aa)
LIP_0104Cytochrome C oxidase subunit III. (211 aa)
LIP_0105Cytochrome C oxidase; Belongs to the heme-copper respiratory oxidase family. (577 aa)
LIP_0106Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (274 aa)
LIP_0108Bb3-type cytochrome oxidase subunit IV. (202 aa)
LIP_0172Zinc permease. (246 aa)
LIP_0244Hypothetical protein. (131 aa)
LIP_0274Chromate transporter. (178 aa)
LIP_0348Arsenical pump membrane protein. (448 aa)
LIP_0408Sulfate permease. (560 aa)
LIP_0520Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
LIP_0638Cobalamin biosynthesis protein CbiM. (218 aa)
LIP_0640Cobalt ABC transporter permease. (251 aa)
LIP_0661Potassium transporter. (496 aa)
LIP_0674Amino acid ABC transporter substrate-binding protein. (341 aa)
LIP_0714Zinc transporter ZitB. (320 aa)
LIP_0735Iron transporter. (166 aa)
LIP_0736Ferrous iron transporter B. (480 aa)
LIP_0776Magnesium transporter; Acts as a magnesium transporter. (450 aa)
LIP_0793Hypothetical protein. (329 aa)
LIP_0854ChrA protein. (419 aa)
LIP_1011Iron permease. (517 aa)
LIP_1087Hypothetical protein. (265 aa)
LIP_1109Mechanosensitive ion channel protein MscS. (329 aa)
LIP_1180Cation transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (294 aa)
hppAPotassium transporter; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily. (681 aa)
LIP_1397Hypothetical protein. (151 aa)
LIP_1493Molybdenum ABC transporter permease. (303 aa)
LIP_1518C4-dicarboxylate ABC transporter. (427 aa)
LIP_1583ATPase. (927 aa)
LIP_1654ATP synthase. (436 aa)
LIP_1718Heavy metal translocating P-type ATPase. (659 aa)
LIP_1789TrkH family potassium uptake protein. (459 aa)
LIP_1825NADH-quinone oxidoreductase subunit L. (641 aa)
LIP_1832Cation:proton antiporter. (131 aa)
LIP_1833Monovalent cation/H+ antiporter subunit F. (93 aa)
LIP_1834Monovalent cation/H+ antiporter subunit E. (157 aa)
LIP_1907Membrane protein. (263 aa)
LIP_1908Gluconate permease. (453 aa)
LIP_1960Cytochrome C oxidase subunit II. (160 aa)
LIP_1961Cytochrome C oxidase subunit I. (552 aa)
LIP_1978Sodium:proton antiporter. (598 aa)
LIP_1980Cation transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (302 aa)
LIP_2258Hypothetical protein. (109 aa)
LIP_2261Hypothetical protein. (269 aa)
LIP_2502TrkA-N domain protein. (222 aa)
crcBCamphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (151 aa)
crcB-2Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (122 aa)
LIP_2687Transporter. (542 aa)
LIP_2697Potassium transporter TrkA. (457 aa)
LIP_2698Trk system potassium transporter TrkH. (486 aa)
LIP_2749ABC transporter ATP-binding protein. (249 aa)
LIP_2753Nitric oxide reductase. (788 aa)
LIP_2817Gluconate transporter. (448 aa)
LIP_2880Transporter. (453 aa)
LIP_2938Membrane protein. (336 aa)
LIP_2954Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family. (251 aa)
LIP_2995ATPase P. (761 aa)
LIP_3025Biotin synthase. (183 aa)
pstBPhosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (251 aa)
LIP_3038Phosphate ABC transporter permease. (280 aa)
atpCF0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (136 aa)
atpDF0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (478 aa)
atpGF0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (314 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (504 aa)
atpHF0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (187 aa)
atpFF0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (181 aa)
LIP_3091F0F1 ATP synthase subunit C. (71 aa)
atpBF0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (226 aa)
LIP_3108NADH:ubiquinone oxidoreductase subunit L. (632 aa)
pstB-2Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (262 aa)
LIP_3225Hypothetical protein. (234 aa)
LIP_3319Anion transporter. (323 aa)
LIP_3345HAD family hydrolase. (681 aa)
LIP_3351Hypothetical protein. (431 aa)
LIP_3353Metal transporter family GufA protein. (271 aa)
LIP_3368ATPase P. (721 aa)
LIP_3384ATPase. (631 aa)
LIP_3399ATPase. (935 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)
LIP_3456Cytochrome C oxidase subunit II. (118 aa)
LIP_3461Hypothetical protein. (725 aa)
LIP_3469ATPase P. (91 aa)
LIP_3470ATPase. (899 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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