STRINGSTRING
LIP_1013 LIP_1013 LIP_0192 LIP_0192 LIP_0193 LIP_0193 LIP_0331 LIP_0331 LIP_0345 LIP_0345 tatA tatA LIP_0384 LIP_0384 LIP_0412 LIP_0412 LIP_0638 LIP_0638 LIP_0639 LIP_0639 LIP_0640 LIP_0640 LIP_0683 LIP_0683 tatA-2 tatA-2 LIP_0812 LIP_0812 LIP_0850 LIP_0850 LIP_0871 LIP_0871 LIP_0876 LIP_0876 LIP_0877 LIP_0877 LIP_0881 LIP_0881 LIP_1011 LIP_1011 LIP_2009 LIP_2009 LIP_2053 LIP_2053 LIP_2090 LIP_2090 LIP_2197 LIP_2197 LIP_2285 LIP_2285 LIP_2502 LIP_2502 LIP_2697 LIP_2697 LIP_2764 LIP_2764 LIP_2765 LIP_2765 LIP_2797 LIP_2797 LIP_2911 LIP_2911 LIP_3026 LIP_3026 LIP_3027 LIP_3027 LIP_3054 LIP_3054 LIP_3055 LIP_3055 nuoK-2 nuoK-2 nuoI-2 nuoI-2 nuoB-2 nuoB-2 tatC tatC tatA-3 tatA-3 tatC-2 tatC-2 LIP_3351 LIP_3351 LIP_3363 LIP_3363 LIP_3364 LIP_3364 LIP_3510 LIP_3510 LIP_1014 LIP_1014 LIP_1112 LIP_1112 LIP_1114 LIP_1114 LIP_1152 LIP_1152 LIP_1190 LIP_1190 LIP_1197 LIP_1197 LIP_1314 LIP_1314 LIP_1357 LIP_1357 LIP_1474 LIP_1474 nuoB nuoB nuoI nuoI nuoK nuoK LIP_1826 LIP_1826 LIP_1945 LIP_1945 LIP_1974 LIP_1974 LIP_1975 LIP_1975 LIP_1978 LIP_1978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_1013ABC transporter. (568 aa)
LIP_0192ABC transporter. (289 aa)
LIP_0193Sugar ABC transporter permease. (282 aa)
LIP_0331ABC transporter permease. (266 aa)
LIP_0345ABC transporter permease. (301 aa)
tatATwin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (60 aa)
LIP_0384ABC transporter. (457 aa)
LIP_0412ABC transporter. (301 aa)
LIP_0638Cobalamin biosynthesis protein CbiM. (218 aa)
LIP_0639Cobalt ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (321 aa)
LIP_0640Cobalt ABC transporter permease. (251 aa)
LIP_0683ABC transporter related protein. (260 aa)
tatA-2Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (60 aa)
LIP_0812ABC transporter permease. (282 aa)
LIP_0850Hypothetical protein. (389 aa)
LIP_0871Ferredoxin. (615 aa)
LIP_0876Cobalt ABC transporter ATP-binding protein. (283 aa)
LIP_0877Cobalt ABC transporter ATP-binding protein. (272 aa)
LIP_0881Taurine ABC transporter permease. (277 aa)
LIP_1011Iron permease. (517 aa)
LIP_2009Sugar ABC transporter permease. (285 aa)
LIP_2053Heme ABC transporter ATP-binding protein. (533 aa)
LIP_2090Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily. (360 aa)
LIP_2197ABC transporter permease. (269 aa)
LIP_2285Sugar ABC transporter permease. (274 aa)
LIP_2502TrkA-N domain protein. (222 aa)
LIP_2697Potassium transporter TrkA. (457 aa)
LIP_2764ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (395 aa)
LIP_2765Membrane protein. (575 aa)
LIP_2797ABC transporter. (275 aa)
LIP_2911Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (370 aa)
LIP_3026Cobalt ABC transporter ATP-binding protein. (291 aa)
LIP_3027Cobalt ABC transporter ATP-binding protein. (294 aa)
LIP_3054Hypothetical protein. (362 aa)
LIP_3055ABC transporter ATP-binding protein. (239 aa)
nuoK-2NADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (99 aa)
nuoI-2NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (172 aa)
nuoB-2NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (161 aa)
tatCPreprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (249 aa)
tatA-3Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (99 aa)
tatC-2Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (265 aa)
LIP_3351Hypothetical protein. (431 aa)
LIP_3363ABC transporter; Belongs to the ABC transporter superfamily. (373 aa)
LIP_3364Iron ABC transporter permease. (530 aa)
LIP_3510ABC transporter. (271 aa)
LIP_1014Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (405 aa)
LIP_1112Glycine/betaine ABC transporter ATP-binding protein. (412 aa)
LIP_1114Glycine/betaine ABC transporter substrate-binding protein. (307 aa)
LIP_1152Sugar ABC transporter substrate-binding protein. (401 aa)
LIP_1190Sugar ABC transporter substrate-binding protein. (396 aa)
LIP_1197Glucose transporter. (371 aa)
LIP_1314Heme ABC transporter ATP-binding protein. (512 aa)
LIP_1357ABC transporter permease. (310 aa)
LIP_1474ABC transporter. (595 aa)
nuoBNADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (170 aa)
nuoINADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (193 aa)
nuoKNADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
LIP_1826NADH:ubiquinone oxidoreductase subunit M. (494 aa)
LIP_1945Hypothetical protein. (602 aa)
LIP_1974ABC transporter permease. (284 aa)
LIP_1975ABC transporter; Belongs to the ABC transporter superfamily. (349 aa)
LIP_1978Sodium:proton antiporter. (598 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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