STRINGSTRING
LIP_0264 LIP_0264 LIP_0802 LIP_0802 LIP_0815 LIP_0815 LIP_1017 LIP_1017 LIP_2080 LIP_2080 LIP_2095 LIP_2095 LIP_2101 LIP_2101 LIP_2866 LIP_2866
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_0264TRAP transporter. (187 aa)
LIP_0802C4-dicarboxylate ABC transporter permease. (213 aa)
LIP_0815Membrane protein. (205 aa)
LIP_1017TRAP dicarboxylate transporter subunit DctM. (634 aa)
LIP_2080C4-dicarboxylate ABC transporter permease. (159 aa)
LIP_2095Hypothetical protein. (185 aa)
LIP_2101C4-dicarboxylate ABC transporter permease. (187 aa)
LIP_2866Hypothetical protein. (141 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.