STRINGSTRING
LIP_1960 LIP_1960 LIP_0106 LIP_0106 LIP_0541 LIP_0541 LIP_0619 LIP_0619 LIP_0810 LIP_0810 LIP_0866 LIP_0866 LIP_0867 LIP_0867 LIP_0868 LIP_0868 LIP_1161 LIP_1161 LIP_3346 LIP_3346 LIP_3361 LIP_3361 LIP_3456 LIP_3456 LIP_3462 LIP_3462 LIP_3471 LIP_3471
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_1960Cytochrome C oxidase subunit II. (160 aa)
LIP_0106Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (274 aa)
LIP_0541Hypothetical protein. (131 aa)
LIP_0619Hypothetical protein. (133 aa)
LIP_0810Hypothetical protein. (153 aa)
LIP_0866Ferroxidase. (329 aa)
LIP_0867Multicopper oxidase. (388 aa)
LIP_0868Multicopper oxidase. (343 aa)
LIP_1161Hypothetical protein. (151 aa)
LIP_3346Nitrite reductase. (353 aa)
LIP_3361Hypothetical protein. (188 aa)
LIP_3456Cytochrome C oxidase subunit II. (118 aa)
LIP_3462Copper-exporting ATPase. (124 aa)
LIP_3471Hypothetical protein. (127 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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