STRINGSTRING
LIP_1504 LIP_1504 LIP_1723 LIP_1723 LIP_1842 LIP_1842 LIP_0526 LIP_0526 LIP_0530 LIP_0530 LIP_0634 LIP_0634 LIP_0722 LIP_0722 LIP_1048 LIP_1048 LIP_1422 LIP_1422 LIP_2025 LIP_2025 LIP_2133 LIP_2133 LIP_2137 LIP_2137 LIP_2155 LIP_2155 LIP_2229 LIP_2229 LIP_2347 LIP_2347 LIP_2460 LIP_2460 LIP_3221 LIP_3221
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_1504Glutathione ABC transporter permease. (308 aa)
LIP_1723Peptide ABC transporter permease. (342 aa)
LIP_1842ABC transporter substrate-binding protein. (323 aa)
LIP_0526Glutathione ABC transporter permease. (306 aa)
LIP_0530Peptide ABC transporter. (324 aa)
LIP_0634Peptide ABC transporter permease. (318 aa)
LIP_0722ABC transporter permease. (392 aa)
LIP_1048Peptide ABC transporter permease. (351 aa)
LIP_1422Peptide ABC transporter permease. (322 aa)
LIP_2025Peptide ABC transporter permease. (314 aa)
LIP_2133Glutathione ABC transporter permease. (315 aa)
LIP_2137Peptide ABC transporter permease. (346 aa)
LIP_2155Peptide ABC transporter permease. (316 aa)
LIP_2229Glutathione ABC transporter permease. (306 aa)
LIP_2347Peptide ABC transporter. (312 aa)
LIP_2460ABC transporter permease. (323 aa)
LIP_3221Peptide ABC transporter. (314 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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