STRINGSTRING
pheA pheA metN metN LIP_2632 LIP_2632 LIP_2565 LIP_2565 LIP_1785 LIP_1785 LIP_1773 LIP_1773 LIP_1770 LIP_1770 LIP_1749 LIP_1749 LIP_1256 LIP_1256 LIP_1254 LIP_1254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pheAHypothetical protein. (672 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)
LIP_2632(p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (740 aa)
LIP_2565Aspartate kinase; Belongs to the aspartokinase family. (430 aa)
LIP_1785Prephenate dehydrogenase. (367 aa)
LIP_1773Homoserine dehydrogenase. (430 aa)
LIP_1770Aspartate kinase; Belongs to the aspartokinase family. (417 aa)
LIP_1749Magnesium transporter MgtC. (221 aa)
LIP_12563-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (551 aa)
LIP_1254Acetolactate synthase. (173 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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