STRINGSTRING
LIP_3399 LIP_3399 LIP_3470 LIP_3470 LIP_1583 LIP_1583 LIP_1718 LIP_1718 LIP_2995 LIP_2995 LIP_3345 LIP_3345 LIP_3368 LIP_3368 LIP_3384 LIP_3384 LIP_3461 LIP_3461
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIP_3399ATPase. (935 aa)
LIP_3470ATPase. (899 aa)
LIP_1583ATPase. (927 aa)
LIP_1718Heavy metal translocating P-type ATPase. (659 aa)
LIP_2995ATPase P. (761 aa)
LIP_3345HAD family hydrolase. (681 aa)
LIP_3368ATPase P. (721 aa)
LIP_3384ATPase. (631 aa)
LIP_3461Hypothetical protein. (725 aa)
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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