Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OJG64929.1 | rbsK | RV09_GL001347 | RV09_GL001907 | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.470 |
| OJG65736.1 | rbsK | RV09_GL001076 | RV09_GL001907 | 1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.417 |
| OJG66155.1 | OJG67869.1 | RV09_GL001004 | RV09_GL001980 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.928 |
| OJG66155.1 | iolC | RV09_GL001004 | RV09_GL001505 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.453 |
| OJG67083.1 | OJG69047.1 | RV09_GL002992 | RV09_GL000446 | Carbohydrate kinase. | Phosphomethylpyrimidine kinase. | 0.418 |
| OJG67083.1 | OJG69280.1 | RV09_GL002992 | RV09_GL000679 | Carbohydrate kinase. | Phosphomethylpyrimidine kinase. | 0.418 |
| OJG67869.1 | OJG66155.1 | RV09_GL001980 | RV09_GL001004 | 1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.928 |
| OJG67869.1 | iolC | RV09_GL001980 | RV09_GL001505 | 1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.452 |
| OJG69047.1 | OJG67083.1 | RV09_GL000446 | RV09_GL002992 | Phosphomethylpyrimidine kinase. | Carbohydrate kinase. | 0.418 |
| OJG69047.1 | OJG69280.1 | RV09_GL000446 | RV09_GL000679 | Phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine kinase. | 0.976 |
| OJG69047.1 | iolC | RV09_GL000446 | RV09_GL001505 | Phosphomethylpyrimidine kinase. | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.418 |
| OJG69047.1 | rbsK | RV09_GL000446 | RV09_GL001907 | Phosphomethylpyrimidine kinase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.425 |
| OJG69047.1 | thiM | RV09_GL000446 | RV09_GL000680 | Phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.969 |
| OJG69280.1 | OJG67083.1 | RV09_GL000679 | RV09_GL002992 | Phosphomethylpyrimidine kinase. | Carbohydrate kinase. | 0.418 |
| OJG69280.1 | OJG69047.1 | RV09_GL000679 | RV09_GL000446 | Phosphomethylpyrimidine kinase. | Phosphomethylpyrimidine kinase. | 0.976 |
| OJG69280.1 | iolC | RV09_GL000679 | RV09_GL001505 | Phosphomethylpyrimidine kinase. | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 0.418 |
| OJG69280.1 | rbsK | RV09_GL000679 | RV09_GL001907 | Phosphomethylpyrimidine kinase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.425 |
| OJG69280.1 | thiM | RV09_GL000679 | RV09_GL000680 | Phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.998 |
| iolC | OJG66155.1 | RV09_GL001505 | RV09_GL001004 | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.453 |
| iolC | OJG67869.1 | RV09_GL001505 | RV09_GL001980 | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). | 1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.452 |
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