Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| tdcA | tdcB | Z4470 | Z4469 | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | 0.863 |
| tdcA | tdcC | Z4470 | Z4468 | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | 0.750 |
| tdcA | tdcR | Z4470 | Z4471 | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | Threonine dehydratase operon activator protein; Residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 Strain MG1655: B3119. | 0.934 |
| tdcA | yhaR | Z4470 | Z4465 | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | 0.423 |
| tdcB | tdcA | Z4469 | Z4470 | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | 0.863 |
| tdcB | tdcC | Z4469 | Z4468 | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | 0.976 |
| tdcB | yhaR | Z4469 | Z4465 | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | 0.914 |
| tdcC | tdcA | Z4468 | Z4470 | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | 0.750 |
| tdcC | tdcB | Z4468 | Z4469 | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | 0.976 |
| tdcC | yhaR | Z4468 | Z4465 | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | 0.820 |
| tdcR | tdcA | Z4471 | Z4470 | Threonine dehydratase operon activator protein; Residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 Strain MG1655: B3119. | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | 0.934 |
| tdcR | yhaR | Z4471 | Z4465 | Threonine dehydratase operon activator protein; Residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 Strain MG1655: B3119. | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | 0.796 |
| yhaR | tdcA | Z4465 | Z4470 | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | Transcriptional activator of tdc operon; Transcriptional activator for the tdcABCDE operon. Belongs to the LysR transcriptional regulatory family. | 0.423 |
| yhaR | tdcB | Z4465 | Z4469 | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | Threonine dehydratase, catabolic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. TdcB also dehydrates serine to [...] | 0.914 |
| yhaR | tdcC | Z4465 | Z4468 | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | Anaerobically inducible L-threonine, L-serine permease; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily. | 0.820 |
| yhaR | tdcR | Z4465 | Z4471 | Orf, hypothetical protein; Residues 1 to 150 of 150 are 99.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 Strain MG1655: B3113. | Threonine dehydratase operon activator protein; Residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 Strain MG1655: B3119. | 0.796 |