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smtA smtA yecD yecD yecE yecE yecN yecN yecO yecO yecP yecP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smtAS-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs. (261 aa)
yecDOrf, hypothetical protein; Residues 1 to 199 of 199 are 100.00 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 Strain MG1655: B1867; Belongs to the isochorismatase family. (199 aa)
yecEOrf, hypothetical protein; Residues 1 to 272 of 272 are 99.63 pct identical to residues 1 to 272 of 272 from Escherichia coli K-12 Strain MG1655: B1868; Belongs to the UPF0759 family. (272 aa)
yecNOrf, hypothetical protein; Residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 Strain MG1655: B1869. (141 aa)
yecOOrf, hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). (247 aa)
yecPPutative enzyme; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. (323 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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