STRINGSTRING
psiF psiF yccT yccT csgG csgG csgF csgF csgE csgE csgD csgD csgB csgB csgA csgA csgC csgC ycfT ycfT yehR yehR yjjA yjjA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psiFInduced by phosphate starvation; Residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 Strain MG1655: B0384. (112 aa)
yccTOrf, hypothetical protein; Residues 1 to 220 of 220 are 100.00 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 Strain MG1655: B0964; Belongs to the UPF0319 family. (220 aa)
csgGCurli production assembly/transport component, 2nd curli operon; May be involved in the biogenesis of curli organelles. (277 aa)
csgFCurli production assembly/transport component, 2nd curli operon; May be involved in the biogenesis of curli organelles. (138 aa)
csgECurli production assembly/transport component, 2nd curli operon; May be involved in the biogenesis of curli organelles. (129 aa)
csgDPutative 2-component transcriptional regulator for 2nd curli operon; Residues 1 to 216 of 216 are 99.07 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 Strain MG1655: B1040. (216 aa)
csgBMinor curlin subunit precursor, similar ro CsgA; Curlin is the structural subunit of the curli. Curli are coiled surface structures that assemble preferentially at growth temperatures below 37 degrees Celsius. Curli can bind to fibronectin. The minor subunit is the nucleation component of curlin monomers (By similarity); Belongs to the CsgA/CsgB family. (151 aa)
csgACurlin major subunit, coiled surface structures; Curlin is the structural subunit of the curli. Curli are coiled surface structures that assemble preferentially at growth temperatures below 37 degrees Celsius. Curli can bind to fibronectin; Belongs to the CsgA/CsgB family. (152 aa)
csgCPutative curli production protein; Residues 1 to 110 of 110 are 98.18 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 Strain MG1655: B1043. (110 aa)
ycfTOrf, hypothetical protein; Residues 1 to 357 of 357 are 98.87 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 Strain MG1655: B1115. (357 aa)
yehROrf, hypothetical protein; Residues 1 to 157 of 157 are 100.00 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 Strain MG1655: B2123. (157 aa)
yjjAPutative glycoprotein/receptor; Residues 1 to 165 of 165 are 99.39 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 Strain MG1655: B4360. (165 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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