STRINGSTRING
ydjX ydjX ydjY ydjY ydjZ ydjZ ynjA ynjA ynjB ynjB ynjC ynjC ynjD ynjD ynjE ynjE ynjF ynjF nudG nudG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydjXOrf, hypothetical protein; Residues 1 to 252 of 252 are 97.22 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1750. (252 aa)
ydjYOrf, hypothetical protein; Residues 1 to 279 of 279 are 97.84 pct identical to residues 1 to 279 of 279 from Escherichia coli K-12 Strain MG1655: B1751. (279 aa)
ydjZOrf, hypothetical protein; Residues 1 to 235 of 235 are 98.72 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 Strain MG1655: B1752. (235 aa)
ynjAOrf, hypothetical protein; Residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 Strain MG1655: B1753. (182 aa)
ynjBOrf, hypothetical protein; Residues 1 to 389 of 389 are 98.20 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 Strain MG1655: B1754. (389 aa)
ynjCPutative transport system permease protein; Residues 1 to 496 of 496 are 96.37 pct identical to residues 1 to 496 of 496 from Escherichia coli K-12 Strain MG1655: B1755. (496 aa)
ynjDPutative ATP-binding component of a transport system; Residues 1 to 217 of 217 are 97.69 pct identical to residues 1 to 217 of 217 from Escherichia coli K-12 Strain MG1655: B1756. (217 aa)
ynjEPutative thiosulfate sulfur transferase; Residues 1 to 440 of 440 are 98.18 pct identical to residues 1 to 440 of 440 from Escherichia coli K-12 Strain MG1655: B1757. (440 aa)
ynjFPutative cytochrome oxidase; Residues 1 to 208 of 208 are 98.55 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 Strain MG1655: B1758; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (208 aa)
nudGOrf, hypothetical protein; Residues 1 to 135 of 135 are 98.51 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 Strain MG1655: B1759; Belongs to the Nudix hydrolase family. (135 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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