STRINGSTRING
Z0415 Z0415 Z0416 Z0416 Z0417 Z0417 Z0418 Z0418 Z0419 Z0419 mglC mglC mglA mglA mglB mglB rbsD rbsD rbsA rbsA rbsC rbsC rbsB rbsB rbsK rbsK rbsR rbsR Z5689 Z5689 Z5690 Z5690 rbsA2 rbsA2 ytfQ ytfQ ytfR ytfR ytfT ytfT yjfF yjfF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z0415Putative periplasmic binding protein, probable substrate ribose; Residues 16 to 324 of 328 are 27.38 pct identical to residues 15 to 335 of 340 from GenPept 118 : gi|1787795|gb|AAC74589.1| (AE000249) putative LACI-type transcriptional regulator [Escherichia coli]. (328 aa)
Z0416Putative ATP-binding component of transport system; Residues 5 to 86 of 86 are 53.65 pct identical to residues 13 to 93 of 104 from GenPept 118 : gi|5459215|emb|CAB48888.1| (AL096837) putative ABC transporter ATP-binding protein [Streptomyces coelicolor A3(2)]. (86 aa)
Z0417Putative ATP-binding component of transport system, probably ribose specific; Residues 13 to 392 of 392 are 36.64 pct identical to residues 114 to 491 of 493 from GenPept 118 : gi|2636119|emb|CAB15611.1| (Z99122) ribose ABC transporter (ATP-binding protein) [Bacillus subtilis]. (392 aa)
Z0418Putative permease component of transport system, probably ribose specific; Residues 16 to 309 of 323 are 36.05 pct identical to residues 32 to 316 of 651 from GenPept 118 : gi|6714794|emb|CAB66286.1| (AL136519) bifunctional carbohydrate binding and transport protein. [Streptomyces coelicolor A3(2)]; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
Z0419Putative permease component of transport system, probably ribose specific; Residues 14 to 303 of 318 are 34.69 pct identical to residues 26 to 311 of 322 from GenPept 118 : gi|2636120|emb|CAB15612.1| (Z99122) ribose ABC transporter (permease) [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
mglCMethyl-galactoside transport and galactose taxis; Residues 1 to 336 of 336 are 99.70 pct identical to residues 1 to 336 of 336 from Escherichia coli K-12 Strain MG1655: B2148; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
mglAATP-binding component of methyl-galactoside transport and galactose taxis; Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system. (506 aa)
mglBGalactose-binding transport protein; Residues 1 to 332 of 332 are 99.69 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 Strain MG1655: B2150. (332 aa)
rbsDD-ribose high-affinity transport system; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (143 aa)
rbsAATP-binding component of D-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)
rbsCD-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Probably responsible for the translocation of the substrate across the membrane. (321 aa)
rbsBD-ribose periplasmic binding protein; Residues 1 to 296 of 296 are 99.66 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 Strain MG1655: B3751. (296 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (309 aa)
rbsRRegulator for rbs operon; Transcriptional repressor for the ribose rbsDACBK operon. RbsR binds to a region of perfect dyad symmetry spanning the rbs operon transcriptional start site. The affinity for the rbs operator is reduced by addition of ribose, consistent with ribose being the inducer of the operon (By similarity). (330 aa)
Z5689Putative periplasmic ribose-binding protein of ABC transport system; Residues 6 to 309 of 313 are 35.04 pct identical to residues 348 to 651 of 651 from GenPept 118 : gi|6714794|emb|CAB66286.1| (AL136519) bifunctional carbohydrate binding and transport protein. [Streptomyces coelicolor A3(2)]. (313 aa)
Z5690Putative permease of ribose ABC transport system; Residues 2 to 318 of 324 are 43.78 pct identical to residues 3 to 321 of 322 from GenPept 118 : gi|2636120|emb|CAB15612.1| (Z99122) ribose ABC transporter (permease) [Bacillus subtilis]; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
rbsA2Putative ATP-binding protein of ribose ABC transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (517 aa)
ytfQPutative LACI-type transcriptional regulator; Residues 1 to 318 of 318 are 99.68 pct identical to residues 1 to 318 of 318 from Escherichia coli K-12 Strain MG1655: B4227. (318 aa)
ytfRPutative ATP-binding component of ABC transporter; Part of the ABC transporter complex YtfQRT-YjfF involved in galactofuranose transport. Responsible for energy coupling to the transport system. (500 aa)
ytfTPutative transport system permease protein; Residues 1 to 341 of 341 are 98.82 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 Strain MG1655: B4230; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
yjfFPutative transport system permease protein; Residues 1 to 323 of 323 are 99.69 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 Strain MG1655: B4231; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.