STRINGSTRING
ybjL ybjL ybjM ybjM yciO yciO yciV yciV trpL trpL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybjLPutative transport protein; Residues 1 to 561 of 561 are 100.00 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 Strain MG1655: B0847. (561 aa)
ybjMOrf, hypothetical protein; Residues 1 to 125 of 125 are 100.00 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 Strain MG1655: B0848. (125 aa)
yciOOrf, hypothetical protein; Residues 1 to 218 of 218 are 100.00 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 Strain MG1655: B1267; Belongs to the SUA5 family. (218 aa)
yciVPutative enzymes; Residues 1 to 293 of 293 are 98.63 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1266. (293 aa)
trpLTrp operon leader peptide; This protein is involved in control of the biosynthesis of tryptophan. (14 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (30%) [HD]