STRINGSTRING
espY1 espY1 espY3 espY3 espX7 espX7 yjbI yjbI yjcF yjcF EspX6 EspX6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
espY1Hypothetical protein; Residues 1 to 192 of 250 are 87.50 pct identical to residues 1 to 192 of 216 from Escherichia coli K-12 Strain MG1655: B0056. (250 aa)
espY3Hypothetical protein; Residues 173 to 335 of 523 are 27.54 pct identical to residues 124 to 287 of 295 from GenPept 118 : gi|886362|gb|AAA69501.1| (L42525) product unknown; 32 kd ORF [Plasmid pSW200]. (523 aa)
espX7Unknown protein encoded by prophage CP-933N; Residues 62 to 648 of 649 are 31.14 pct identical to residues 184 to 781 of 782 from GenPept 118 : gi|5669806|gb|AAD46479.1|AF121227_1 (AF121227) secreted effector protein [Salmonella dublin]. (649 aa)
yjbIHypothetical protein; Residues 86 to 526 of 526 are 88.66 pct identical to residues 2 to 442 of 442 from Escherichia coli K-12 Strain MG1655: B4038. (526 aa)
yjcFOrf, hypothetical protein; Residues 1 to 430 of 430 are 96.04 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 Strain MG1655: B4066. (430 aa)
EspX6Hypothetical protein; Residues 386 to 599 of 731 are 28.03 pct identical to residues 79 to 268 of 295 from GenPept 118 : gi|886362|gb|AAA69501.1| (L42525) product unknown; 32 kd ORF [Plasmid pSW200]. (731 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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