STRINGSTRING
ydjX ydjX yqaA yqaA dedA dedA yohD yohD yghB yghB ydjZ ydjZ yabI yabI yqjA yqjA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydjXOrf, hypothetical protein; Residues 1 to 252 of 252 are 97.22 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1750. (252 aa)
yqaAOrf, hypothetical protein; Residues 1 to 142 of 142 are 99.29 pct identical to residues 1 to 142 of 142 from Escherichia coli K-12 Strain MG1655: B2689. (142 aa)
dedAOrf, hypothetical protein; Residues 1 to 219 of 219 are 99.54 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B2317. (219 aa)
yohDOrf, hypothetical protein; Residues 1 to 204 of 204 are 99.01 pct identical to residues 1 to 204 of 204 from Escherichia coli K-12 Strain MG1655: B2136. (204 aa)
yghBOrf, hypothetical protein; Residues 1 to 219 of 219 are 100.00 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B3009. (219 aa)
ydjZOrf, hypothetical protein; Residues 1 to 235 of 235 are 98.72 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 Strain MG1655: B1752. (235 aa)
yabIOrf, hypothetical protein; Residues 1 to 254 of 254 are 98.81 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 Strain MG1655: B0065. (254 aa)
yqjAOrf, hypothetical protein; Residues 1 to 220 of 220 are 100.00 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 Strain MG1655: B3095. (220 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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