STRINGSTRING
dksA dksA Z6030 Z6030 mopA mopA mopB mopB Z3311 Z3311 trpD trpD umuD umuD Z1916 Z1916 Z1888 Z1888 Z1537 Z1537 Z1534 Z1534 Z0980 Z0980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dksAdnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. (151 aa)
Z6030Putative tail component of cryptic prophage CP-933P; Residues 61 to 451 of 451 are 96.93 pct identical to residues 1 to 391 of 391 from Genpept121: dbj|BAB19563.1| (AP000400) host specificity protein J [Escherichia coli O157:H7]. (451 aa)
mopAGroEL, chaperone Hsp60, peptide-dependent ATPase, heat shock protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (548 aa)
mopBGroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. (97 aa)
Z3311Putative tail fiber protein of prophage CP-933V; Residues 1to 1164 of 1165 are 70.85 pct identical to residues 1to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda]. (1165 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (531 aa)
umuDSOS mutagenesis; Involved in UV protection and mutation. Essential for induced (or SOS) mutagenesis. May modify the DNA replication machinery to allow bypass synthesis across a damaged template (By similarity). (139 aa)
Z1916Putative tail protein (partial) of prophage CP-933X; Residues 1 to 781 of 782 are 62.37 pct identical to residues 376 to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda]. (782 aa)
Z1888Putative capsid protein of prophage CP-933X; Residues 1 to 341 of 341 are 98.82 pct identical to residues 1 to 341 of 341 from GenPept 118 : gi|215112|gb|AAA96540.1| (J02459) E (capsid component;341) [bacteriophage lambda]. (341 aa)
Z1537Putative chaperone; Residues 6 to 240 of 240 are 39.33 pct identical to residues 4 to 214 of 214 from GenPept 118 : gi|4106625|emb|CAA21380.1| (AL031866) ORF57, len=214 aa, similar to yehC, E. coli hypothetical 26.6 K D fimbrial chaperon (239 aa). (240 aa)
Z1534Putative chaperone; Residues 4 to 224 of 229 are 44.68 pct identical to residues 3 to 237 of 246 from GenPept 118 : gi|3818597|gb|AAC69580.1| (AF091251) unknown [Yersinia pestis]. (229 aa)
Z0980Putative tail component of prophage CP-933K; Residues 1 to 1137 of 1138 are 87.48 pct identical to residues 1 to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda]. (1138 aa)
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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