(11 nodes) Mixed, incl. Galactonate metabolic process, and Pentose and glucuronate interconversions network (Sphingomonas panacis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOH82793.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (62 aa)
	AOH82794.1	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AOH82795.1	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	AOH86406.1	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AOH82796.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	AOH82798.1	2,5-dioxovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
	AOH82799.1	FAH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	AOH86407.1	Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	AOH82801.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (70 aa)
	AOH83920.1	Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	AOH86624.1	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)

Your Current Organism:

Sphingomonas panacis

NCBI taxonomy Id: 1560345
Other names: JCM 30806, KCTC 42347, S. panacis, Sphingomonas panacis Singh et al. 2017, Sphingomonas sp. DCY99, strain DCY99

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOH82793.1	AOH82794.1	AWL63_01145	AWL63_01150	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AOH82793.1	AOH82795.1	AWL63_01145	AWL63_01155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AOH82793.1	AOH82796.1	AWL63_01145	AWL63_01165	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AOH82793.1	AOH86406.1	AWL63_01145	AWL63_01160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AOH82794.1	AOH82793.1	AWL63_01150	AWL63_01145	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.639
AOH82794.1	AOH82795.1	AWL63_01150	AWL63_01155	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AOH82794.1	AOH82796.1	AWL63_01150	AWL63_01165	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
AOH82794.1	AOH82798.1	AWL63_01150	AWL63_01175	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,5-dioxovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AOH82794.1	AOH82799.1	AWL63_01150	AWL63_01180	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
AOH82794.1	AOH86406.1	AWL63_01150	AWL63_01160	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
AOH82794.1	AOH86407.1	AWL63_01150	AWL63_01185	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
AOH82795.1	AOH82793.1	AWL63_01155	AWL63_01145	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.639
AOH82795.1	AOH82794.1	AWL63_01155	AWL63_01150	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AOH82795.1	AOH82796.1	AWL63_01155	AWL63_01165	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
AOH82795.1	AOH82799.1	AWL63_01155	AWL63_01180	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
AOH82795.1	AOH83920.1	AWL63_01155	AWL63_08025	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
AOH82795.1	AOH86406.1	AWL63_01155	AWL63_01160	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
AOH82795.1	AOH86407.1	AWL63_01155	AWL63_01185	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AOH82795.1	AOH86624.1	AWL63_01155	AWL63_08030	2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
AOH82796.1	AOH82793.1	AWL63_01165	AWL63_01145	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.639